Variant report

Variant	rs12407610
Chromosome Location	chr1:77707310-77707311
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs1010195	0.91[CHB][hapmap];0.84[CHD][hapmap];0.89[GIH][hapmap];0.89[TSI][hapmap]
rs10493604	0.86[CHB][hapmap];0.84[CHD][hapmap];0.86[GIH][hapmap];0.89[TSI][hapmap]
rs12091579	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12095740	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1377735	0.86[CHB][hapmap]
rs1592340	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17100308	0.95[CHB][hapmap];0.84[JPT][hapmap]
rs2272161	0.82[ASN][1000 genomes]
rs2815321	0.88[ASN][1000 genomes]
rs2815322	0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3921995	0.80[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs940283	0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:77707000-77713200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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