Variant report

Variant rs12407685
Chromosome Location chr1:246461279-246461280
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:27 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:246423400-246509000 Weak transcription Aorta Aorta
2 chr1:246441800-246506600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
3 chr1:246443200-246469000 Weak transcription Primary hematopoietic stem cells blood
4 chr1:246447600-246482400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:246447600-246502800 Weak transcription Left Ventricle heart
6 chr1:246452000-246465200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr1:246455000-246463600 Weak transcription Fetal Kidney kidney
8 chr1:246455000-246493000 Weak transcription Primary B cells from cord blood blood
9 chr1:246456800-246466000 Weak transcription iPS-20b Cell Line embryonic stem cell
10 chr1:246457200-246470000 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr1:246458400-246461600 Enhancers HUVEC blood vessel
12 chr1:246458600-246461400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr1:246458800-246461400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr1:246459000-246461400 Enhancers NHEK skin
15 chr1:246459200-246461400 Enhancers HMEC breast
16 chr1:246459400-246464000 Weak transcription Fetal Adrenal Gland Adrenal Gland
17 chr1:246459600-246463800 Weak transcription Fetal Lung lung
18 chr1:246459800-246465200 Weak transcription HSMMtube muscle
19 chr1:246460400-246461400 Enhancers Muscle Satellite Cultured Cells --
20 chr1:246460800-246464600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr1:246460800-246464600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr1:246460800-246465200 Weak transcription HUES48 Cell Line embryonic stem cell
23 chr1:246460800-246465400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr1:246460800-246465800 Weak transcription NH-A brain
25 chr1:246461000-246464200 Weak transcription A549 lung
26 chr1:246461000-246472000 Weak transcription HSMM muscle
27 chr1:246461200-246464600 Weak transcription Osteobl bone

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