Variant report
Variant | rs12409885 |
---|---|
Chromosome Location | chr1:149991147-149991148 |
allele | C/T |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr1:149982800-149994400 | Weak transcription | Gastric | stomach |
2 | chr1:149983000-149992800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
3 | chr1:149985000-149993200 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
4 | chr1:149985200-149993200 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
5 | chr1:149985400-149993000 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
6 | chr1:149985600-149994000 | Weak transcription | Brain Hippocampus Middle | brain |
7 | chr1:149985600-150022000 | Weak transcription | Brain Substantia Nigra | brain |
8 | chr1:149988000-149993200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
9 | chr1:149988200-149992800 | Weak transcription | Adipose Nuclei | Adipose |
10 | chr1:149988200-149992800 | Weak transcription | A549 | lung |
11 | chr1:149988200-149993200 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
12 | chr1:149988200-149993200 | Weak transcription | Osteobl | bone |
13 | chr1:149988400-149993200 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
14 | chr1:149989400-149991200 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
15 | chr1:149989600-149993200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
16 | chr1:149989600-149993200 | Weak transcription | K562 | blood |
17 | chr1:149989600-149997800 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
18 | chr1:149989600-149998000 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
19 | chr1:149989800-149992000 | Weak transcription | Pancreas | Pancrea |
20 | chr1:149989800-149993200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
21 | chr1:149989800-149993200 | Weak transcription | NHEK | skin |
22 | chr1:149989800-149993400 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
23 | chr1:149989800-149993400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
24 | chr1:149989800-149993400 | Weak transcription | HMEC | breast |
25 | chr1:149989800-149993600 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
26 | chr1:149990000-149992800 | Weak transcription | Fetal Intestine Large | intestine |
27 | chr1:149990000-149992800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
28 | chr1:149990000-149993200 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
29 | chr1:149990000-149993400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
30 | chr1:149990000-149993400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
31 | chr1:149990000-149993600 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
32 | chr1:149990400-149993200 | Weak transcription | Placenta | Placenta |
33 | chr1:149990600-149991200 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
34 | chr1:149990600-149992600 | Weak transcription | Stomach Mucosa | stomach |
35 | chr1:149990600-149992600 | Weak transcription | Hela-S3 | cervix |
36 | chr1:149990600-149992800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
37 | chr1:149990600-149998000 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
38 | chr1:149990800-149991200 | Enhancers | GM12878-XiMat | blood |
39 | chr1:149991000-149992800 | Weak transcription | Fetal Intestine Small | intestine |
40 | chr1:149991000-149996000 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |