The 2.0 version of rSNPBase

Variant report

Variant rs12410549
Chromosome Location chr1:186588901-186588902
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:32 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:186587800-186589600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr1:186587800-186589800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr1:186587800-186596200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr1:186588000-186589400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr1:186588000-186589800 Weak transcription Primary T cells fromperipheralblood blood
6 chr1:186588000-186589800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr1:186588000-186589800 Weak transcription Fetal Thymus thymus
8 chr1:186588000-186589800 Weak transcription Rectal Smooth Muscle rectum
9 chr1:186588000-186589800 Weak transcription Stomach Smooth Muscle stomach
10 chr1:186588000-186594800 Weak transcription Colon Smooth Muscle Colon
11 chr1:186588200-186589000 Enhancers Primary hematopoietic stem cells blood
12 chr1:186588200-186589600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr1:186588200-186589600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr1:186588200-186589600 Weak transcription Primary T helper naive cells fromperipheralblood blood
15 chr1:186588200-186589600 Weak transcription Primary T helper cells fromperipheralblood blood
16 chr1:186588200-186589600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr1:186588200-186589600 Weak transcription HMEC breast
18 chr1:186588200-186589600 Weak transcription NHDF-Ad bronchial
19 chr1:186588200-186589600 Weak transcription Osteobl bone
20 chr1:186588200-186590600 Enhancers Primary neutrophils fromperipheralblood blood
21 chr1:186588200-186591000 Enhancers Primary monocytes fromperipheralblood blood
22 chr1:186588200-186591000 Enhancers Primary hematopoietic stem cells short term culture blood
23 chr1:186588200-186591200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr1:186588200-186595800 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr1:186588400-186589400 Weak transcription Primary T cells from cord blood blood
26 chr1:186588400-186589400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr1:186588400-186589600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr1:186588400-186589600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr1:186588400-186589600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr1:186588400-186589600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr1:186588400-186589600 Weak transcription Dnd41 blood
32 chr1:186588400-186591400 Enhancers Monocytes-CD14+_RO01746 blood

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Last update: Aug 31, 2015