The 2.0 version of rSNPBase

Variant report

Variant rs12094398
Chromosome Location chr1:186393129-186393130
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:186345400-186398200 Weak transcription Spleen Spleen
2 chr1:186362400-186405600 Weak transcription Brain Angular Gyrus brain
3 chr1:186362800-186405600 Weak transcription Right Ventricle heart
4 chr1:186365600-186395200 Weak transcription Psoas Muscle Psoas
5 chr1:186366200-186393800 Weak transcription Lung lung
6 chr1:186368600-186398200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr1:186372000-186398200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr1:186372000-186406000 Weak transcription Pancreas Pancrea
9 chr1:186376800-186399600 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr1:186379200-186395200 Weak transcription Primary T killer naive cells fromperipheralblood blood
11 chr1:186380000-186398800 Weak transcription Brain Germinal Matrix brain
12 chr1:186388600-186399400 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr1:186388600-186404600 Weak transcription Brain Cingulate Gyrus brain
14 chr1:186388600-186408000 Weak transcription Fetal Brain Female brain
15 chr1:186388600-186411600 Weak transcription A549 lung
16 chr1:186388600-186417400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr1:186388800-186393400 Weak transcription Fetal Heart heart
18 chr1:186388800-186394800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr1:186388800-186396400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
20 chr1:186388800-186397400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr1:186388800-186405800 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr1:186388800-186409400 Weak transcription Colon Smooth Muscle Colon
23 chr1:186388800-186409400 Weak transcription Placenta Amnion Placenta Amnion
24 chr1:186389000-186394400 Weak transcription Brain Hippocampus Middle brain
25 chr1:186389000-186413000 Weak transcription Brain Substantia Nigra brain
26 chr1:186389200-186406400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr1:186389600-186393600 Weak transcription Primary T cells from cord blood blood
28 chr1:186389600-186393600 Weak transcription Left Ventricle heart
29 chr1:186389600-186394400 Weak transcription Brain Inferior Temporal Lobe brain
30 chr1:186389600-186396000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr1:186389600-186396800 Weak transcription Fetal Muscle Trunk muscle
32 chr1:186389600-186397800 Weak transcription Rectal Smooth Muscle rectum
33 chr1:186389600-186405200 Weak transcription Brain Anterior Caudate brain
34 chr1:186389600-186406800 Weak transcription Fetal Muscle Leg muscle
35 chr1:186389600-186407600 Weak transcription Aorta Aorta
36 chr1:186389600-186407800 Weak transcription Primary hematopoietic stem cells short term culture blood
37 chr1:186389600-186409200 Weak transcription HUVEC blood vessel
38 chr1:186389600-186411600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr1:186389600-186415600 Weak transcription Stomach Smooth Muscle stomach
40 chr1:186389800-186394400 Weak transcription Fetal Brain Male brain
41 chr1:186389800-186409000 Weak transcription Hela-S3 cervix
42 chr1:186389800-186411400 Weak transcription Primary hematopoietic stem cells blood
43 chr1:186390000-186405800 Weak transcription Primary T cells fromperipheralblood blood
44 chr1:186390200-186395200 Weak transcription Skeletal Muscle Female skeletal muscle
45 chr1:186390200-186397200 Weak transcription Primary monocytes fromperipheralblood blood
46 chr1:186390200-186398600 Weak transcription Fetal Lung lung
47 chr1:186390400-186393600 Weak transcription HSMM muscle
48 chr1:186390400-186393800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
49 chr1:186390400-186393800 Weak transcription NHEK skin
50 chr1:186390400-186397400 Weak transcription Monocytes-CD14+_RO01746 blood

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Last update: Aug 31, 2015