Variant report

Variant rs12413688
Chromosome Location chr10:99095544-99095545
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:99091400-99095800 Active TSS ES-I3 Cell Line embryonic stem cell
2 chr10:99091400-99095800 Active TSS HUES6 Cell Line embryonic stem cell
3 chr10:99092000-99095600 Active TSS H1 Cell Line embryonic stem cell
4 chr10:99093600-99095800 Active TSS iPS-20b Cell Line embryonic stem cell
5 chr10:99094000-99095800 Active TSS iPS-15b Cell Line embryonic stem cell
6 chr10:99094400-99096000 Active TSS Primary hematopoietic stem cells blood
7 chr10:99094800-99096600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr10:99095000-99095600 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
9 chr10:99095000-99095800 Flanking Active TSS Primary neutrophils fromperipheralblood blood
10 chr10:99095200-99095600 Enhancers Pancreas Pancrea
11 chr10:99095200-99095800 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr10:99095200-99095800 Weak transcription HMEC breast
13 chr10:99095200-99096000 Weak transcription Placenta Amnion Placenta Amnion
14 chr10:99095200-99096200 Weak transcription Brain Inferior Temporal Lobe brain
15 chr10:99095200-99096400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
16 chr10:99095200-99096800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr10:99095200-99096800 Weak transcription Ovary ovary
18 chr10:99095200-99097200 Weak transcription Esophagus oesophagus
19 chr10:99095200-99097400 Enhancers Stomach Mucosa stomach
20 chr10:99095200-99097600 Weak transcription ES-WA7 Cell Line embryonic stem cell
21 chr10:99095200-99097600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr10:99095200-99109400 Weak transcription HSMMtube muscle
23 chr10:99095200-99115200 Weak transcription Gastric stomach
24 chr10:99095400-99095600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr10:99095400-99095600 Weak transcription HUES48 Cell Line embryonic stem cell
26 chr10:99095400-99095600 Active TSS HUES64 Cell Line embryonic stem cell
27 chr10:99095400-99095600 Bivalent Enhancer Primary T cells fromperipheralblood blood
28 chr10:99095400-99095600 Enhancers Primary Natural Killer cells fromperipheralblood blood
29 chr10:99095400-99095600 Weak transcription Brain Angular Gyrus brain
30 chr10:99095400-99095600 Enhancers Duodenum Mucosa Duodenum
31 chr10:99095400-99095600 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr10:99095400-99095600 Weak transcription K562 blood
33 chr10:99095400-99095800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr10:99095400-99095800 Enhancers Primary B cells from cord blood blood
35 chr10:99095400-99096000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr10:99095400-99096000 Enhancers Primary T helper cells fromperipheralblood blood
37 chr10:99095400-99096000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr10:99095400-99096000 Enhancers NHEK skin
39 chr10:99095400-99096400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
40 chr10:99095400-99096400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
41 chr10:99095400-99096600 Weak transcription Adipose Nuclei Adipose
42 chr10:99095400-99096600 Weak transcription Brain Cingulate Gyrus brain
43 chr10:99095400-99096600 Weak transcription Psoas Muscle Psoas
44 chr10:99095400-99096600 Enhancers Hela-S3 cervix
45 chr10:99095400-99096800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr10:99095400-99096800 Weak transcription H9 Cell Line embryonic stem cell
47 chr10:99095400-99096800 Weak transcription Brain Hippocampus Middle brain
48 chr10:99095400-99096800 Weak transcription Brain Substantia Nigra brain
49 chr10:99095400-99096800 Weak transcription Right Atrium heart
50 chr10:99095400-99096800 Weak transcription Skeletal Muscle Male skeletal muscle

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