The 2.0 version of rSNPBase

Variant report

Variant rs12419937
Chromosome Location chr11:100652324-100652325
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:100624600-100655600 Weak transcription Left Ventricle heart
2 chr11:100624600-100655600 Weak transcription Right Ventricle heart
3 chr11:100633200-100655600 Weak transcription Psoas Muscle Psoas
4 chr11:100640000-100655600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr11:100640800-100655200 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr11:100640800-100655200 Weak transcription iPS-20b Cell Line embryonic stem cell
7 chr11:100640800-100655600 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr11:100640800-100655600 Weak transcription HUES6 Cell Line embryonic stem cell
9 chr11:100643200-100658000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr11:100643200-100660000 Weak transcription Stomach Smooth Muscle stomach
11 chr11:100643400-100655600 Weak transcription Fetal Adrenal Gland Adrenal Gland
12 chr11:100645400-100655800 Weak transcription H1 Cell Line embryonic stem cell
13 chr11:100645600-100655600 Weak transcription Gastric stomach
14 chr11:100645600-100679800 Weak transcription Cortex derived primary cultured neurospheres brain
15 chr11:100645800-100655600 Weak transcription H9 Cell Line embryonic stem cell
16 chr11:100645800-100656000 Weak transcription Colonic Mucosa Colon
17 chr11:100645800-100679600 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr11:100646400-100655800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr11:100648800-100654200 Weak transcription Duodenum Mucosa Duodenum
20 chr11:100649000-100654400 Weak transcription Fetal Heart heart
21 chr11:100649000-100655600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr11:100649000-100655600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr11:100649000-100655600 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr11:100649000-100655800 Weak transcription HepG2 liver
25 chr11:100649200-100654200 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr11:100649200-100655000 Weak transcription Fetal Intestine Large intestine
27 chr11:100649600-100654200 Weak transcription Fetal Lung lung
28 chr11:100649600-100654200 Weak transcription Rectal Mucosa Donor 29 rectum
29 chr11:100649600-100655800 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr11:100649800-100654200 Weak transcription Fetal Intestine Small intestine
31 chr11:100649800-100655600 Weak transcription A549 lung
32 chr11:100649800-100661800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr11:100650000-100654200 Weak transcription Stomach Mucosa stomach
34 chr11:100650600-100652800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr11:100651200-100652800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr11:100651400-100655800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr11:100651600-100655600 Weak transcription HUES64 Cell Line embryonic stem cell
38 chr11:100651600-100656000 Weak transcription iPS-18 Cell Line embryonic stem cell
39 chr11:100651800-100653200 Enhancers NHEK skin
40 chr11:100652000-100659600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr11:100652200-100655600 Weak transcription HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015