Variant report

Variant rs12427729
Chromosome Location chr13:76444390-76444391
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:76417600-76444600 Weak transcription HMEC breast
2 chr13:76428000-76444600 Weak transcription Fetal Kidney kidney
3 chr13:76428000-76444800 Weak transcription Esophagus oesophagus
4 chr13:76428200-76444400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr13:76428400-76444600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr13:76428400-76444600 Weak transcription Fetal Heart heart
7 chr13:76429600-76444600 Weak transcription Fetal Muscle Trunk muscle
8 chr13:76431000-76444600 Weak transcription Aorta Aorta
9 chr13:76431600-76444600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr13:76432000-76444600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr13:76432200-76444600 Weak transcription Fetal Intestine Small intestine
12 chr13:76432200-76444600 Weak transcription Fetal Muscle Leg muscle
13 chr13:76432200-76444600 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr13:76433000-76444400 Weak transcription Liver Liver
15 chr13:76435600-76444400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr13:76437200-76444600 Weak transcription HSMMtube muscle
17 chr13:76439800-76444400 Weak transcription A549 lung
18 chr13:76440000-76469200 Weak transcription HSMM muscle
19 chr13:76443000-76444600 Weak transcription Ovary ovary
20 chr13:76443200-76445400 Enhancers HUES48 Cell Line embryonic stem cell
21 chr13:76443400-76444400 Enhancers ES-I3 Cell Line embryonic stem cell
22 chr13:76443400-76444400 Enhancers H9 Cell Line embryonic stem cell
23 chr13:76443400-76445000 Enhancers HUES6 Cell Line embryonic stem cell
24 chr13:76443400-76445000 Enhancers HUES64 Cell Line embryonic stem cell
25 chr13:76443400-76445000 Enhancers iPS-18 Cell Line embryonic stem cell
26 chr13:76443400-76445600 Enhancers iPS-15b Cell Line embryonic stem cell
27 chr13:76443600-76445000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
28 chr13:76443800-76444600 Enhancers iPS-20b Cell Line embryonic stem cell
29 chr13:76443800-76444800 Enhancers Fetal Brain Female brain
30 chr13:76444000-76444400 Enhancers Hela-S3 cervix
31 chr13:76444000-76444600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr13:76444000-76444600 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
33 chr13:76444000-76444600 Active TSS Primary T killer memory cells from peripheral blood blood
34 chr13:76444000-76444800 Enhancers ES-WA7 Cell Line embryonic stem cell
35 chr13:76444000-76444800 Enhancers H1 Cell Line embryonic stem cell
36 chr13:76444000-76445000 Flanking Active TSS Primary T cells from cord blood blood
37 chr13:76444000-76445000 Enhancers Fetal Thymus thymus
38 chr13:76444000-76445400 Active TSS Osteobl bone
39 chr13:76444200-76444400 Enhancers Primary T helper cells PMA-I stimulated --
40 chr13:76444200-76444400 Active TSS Primary T helper cells fromperipheralblood blood
41 chr13:76444200-76444600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
42 chr13:76444200-76444600 Enhancers Breast Myoepithelial Primary Cells Breast
43 chr13:76444200-76444600 Active TSS Primary T cells fromperipheralblood blood
44 chr13:76444200-76444600 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
45 chr13:76444200-76444600 Active TSS Primary T helper memory cells from peripheral blood 1 blood
46 chr13:76444200-76444600 Active TSS Primary T helper 17 cells PMA-I stimulated --
47 chr13:76444200-76444600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr13:76444200-76444600 Enhancers Brain Anterior Caudate brain
49 chr13:76444200-76444600 Enhancers Fetal Lung lung
50 chr13:76444200-76444800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived

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