Variant report

Variant	rs12437877
Chromosome Location	chr15:61477482-61477483
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs1025676	1.00[CEU][hapmap];0.86[CHB][hapmap];0.84[CHD][hapmap];0.88[MEX][hapmap];0.86[TSI][hapmap];0.83[ASN][1000 genomes]
rs10519115	1.00[CEU][hapmap];0.86[CHB][hapmap];0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11071592	1.00[CEU][hapmap]
rs12441507	1.00[CEU][hapmap];0.86[CHB][hapmap];0.88[CHD][hapmap];0.88[MEX][hapmap];0.93[TSI][hapmap];0.80[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12441702	1.00[CEU][hapmap]
rs12442490	1.00[CEU][hapmap];0.86[CHB][hapmap];0.88[CHD][hapmap];0.84[JPT][hapmap];0.88[MEX][hapmap];0.86[TSI][hapmap];0.80[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12593777	0.85[CHB][hapmap];0.80[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1437545	1.00[CEU][hapmap];0.86[CHB][hapmap];0.84[ASN][1000 genomes]
rs1437546	1.00[CEU][hapmap];0.86[CHB][hapmap];0.84[ASN][1000 genomes]
rs1529991	1.00[CEU][hapmap];0.86[CHB][hapmap];0.88[CHD][hapmap];0.88[MEX][hapmap];0.86[TSI][hapmap];0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs16943758	1.00[CEU][hapmap];0.86[CHB][hapmap];0.92[CHD][hapmap];0.88[MEX][hapmap];0.86[TSI][hapmap];0.83[ASN][1000 genomes]
rs16943763	1.00[CEU][hapmap];0.82[ASN][1000 genomes]
rs17237759	0.88[JPT][hapmap]
rs2277557	1.00[CEU][hapmap];0.86[CHD][hapmap];0.88[MEX][hapmap]
rs28611274	0.84[ASN][1000 genomes]
rs28716779	0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs28754581	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4517733	0.84[ASN][1000 genomes]
rs8035563	0.82[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:61462200-61478800	Weak transcription	Fetal Stomach	stomach
2	chr15:61467000-61478600	Weak transcription	Skeletal Muscle Male	skeletal muscle
3	chr15:61467400-61497600	Weak transcription	H9 Cell Line	embryonic stem cell
4	chr15:61475200-61492000	Weak transcription	Ovary	ovary
5	chr15:61475400-61477800	Weak transcription	Psoas Muscle	Psoas
6	chr15:61475400-61477800	Weak transcription	Skeletal Muscle Female	skeletal muscle
7	chr15:61476400-61479000	Weak transcription	Right Atrium	heart
8	chr15:61477200-61477600	Enhancers	Pancreatic Islets	Pancreatic Islet
9	chr15:61477400-61477600	Enhancers	Brain Anterior Caudate	brain
10	chr15:61477400-61477600	Enhancers	Stomach Smooth Muscle	stomach
11	chr15:61477400-61479600	Enhancers	Fetal Lung	lung
12	chr15:61477400-61480200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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