Variant report

Variant rs12441700
Chromosome Location chr15:42657562-42657563
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:42639400-42658600 Weak transcription Hela-S3 cervix
2 chr15:42645600-42663000 Weak transcription NHDF-Ad bronchial
3 chr15:42645600-42663600 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr15:42645600-42677800 Weak transcription Spleen Spleen
5 chr15:42646000-42662600 Weak transcription Brain Substantia Nigra brain
6 chr15:42646000-42678600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr15:42647200-42658400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr15:42647800-42678200 Weak transcription Ovary ovary
9 chr15:42649600-42659000 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr15:42649800-42659800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr15:42649800-42673200 Weak transcription Thymus Thymus
12 chr15:42650200-42659600 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr15:42650600-42661000 Weak transcription Esophagus oesophagus
14 chr15:42650600-42661600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr15:42650800-42659400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr15:42650800-42664000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr15:42651200-42659600 Weak transcription Primary T cells from cord blood blood
18 chr15:42652400-42660600 Weak transcription Aorta Aorta
19 chr15:42652400-42665400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr15:42652800-42684400 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr15:42653200-42659200 Enhancers Psoas Muscle Psoas
22 chr15:42653200-42691600 Weak transcription Stomach Smooth Muscle stomach
23 chr15:42653400-42658000 Transcr. at gene 5' and 3' Skeletal Muscle Female skeletal muscle
24 chr15:42653400-42659600 Weak transcription Fetal Intestine Small intestine
25 chr15:42654200-42657800 Enhancers Primary neutrophils fromperipheralblood blood
26 chr15:42654200-42677800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
27 chr15:42654400-42665400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr15:42654800-42669400 Weak transcription Liver Liver
29 chr15:42656000-42678800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr15:42656400-42657600 Flanking Active TSS Skeletal Muscle Male skeletal muscle
31 chr15:42656800-42657600 Enhancers Monocytes-CD14+_RO01746 blood
32 chr15:42656800-42663600 Enhancers Primary monocytes fromperipheralblood blood
33 chr15:42656800-42693400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr15:42656800-42697800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr15:42657000-42659200 Enhancers Primary B cells from cord blood blood
36 chr15:42657000-42665600 Weak transcription Brain Hippocampus Middle brain
37 chr15:42657000-42665600 Weak transcription Fetal Muscle Trunk muscle
38 chr15:42657200-42657800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
39 chr15:42657200-42659200 Weak transcription Lung lung
40 chr15:42657200-42659400 Weak transcription Brain Inferior Temporal Lobe brain
41 chr15:42657200-42660200 Weak transcription Fetal Muscle Leg muscle
42 chr15:42657200-42665800 Weak transcription Left Ventricle heart
43 chr15:42657200-42678800 Weak transcription Brain Cingulate Gyrus brain

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