The 2.0 version of rSNPBase

Variant report

Variant rs12449905
Chromosome Location chr17:46206321-46206322
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:46188200-46207400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr17:46191200-46220800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr17:46196800-46208800 Weak transcription K562 blood
4 chr17:46197800-46221000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr17:46199400-46212400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr17:46199800-46209600 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr17:46200400-46236600 Weak transcription Primary T killer naive cells fromperipheralblood blood
8 chr17:46200600-46206400 Weak transcription iPS-20b Cell Line embryonic stem cell
9 chr17:46200600-46209000 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr17:46200600-46209600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr17:46200800-46207400 Weak transcription Right Ventricle heart
12 chr17:46200800-46208400 Weak transcription Colon Smooth Muscle Colon
13 chr17:46200800-46209000 Weak transcription Primary T helper naive cells fromperipheralblood blood
14 chr17:46200800-46212400 Weak transcription iPS-18 Cell Line embryonic stem cell
15 chr17:46201000-46206400 Weak transcription Ovary ovary
16 chr17:46201000-46206600 Weak transcription H9 Cell Line embryonic stem cell
17 chr17:46201000-46207600 Weak transcription Dnd41 blood
18 chr17:46201200-46207000 Weak transcription Fetal Intestine Large intestine
19 chr17:46201200-46208000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr17:46201200-46209600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr17:46201400-46207600 Weak transcription Fetal Kidney kidney
22 chr17:46201400-46208400 Weak transcription Brain Angular Gyrus brain
23 chr17:46201400-46217600 Weak transcription Fetal Thymus thymus
24 chr17:46201600-46206400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr17:46201600-46207000 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr17:46203000-46217000 Weak transcription Primary hematopoietic stem cells blood
27 chr17:46203600-46207000 Weak transcription Colonic Mucosa Colon
28 chr17:46203800-46209000 Weak transcription Primary T helper cells fromperipheralblood blood
29 chr17:46204000-46220000 Weak transcription GM12878-XiMat blood
30 chr17:46204200-46208000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr17:46204200-46210800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr17:46204200-46216600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr17:46204200-46225200 Weak transcription Liver Liver
34 chr17:46204400-46207800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr17:46204400-46221000 Weak transcription Thymus Thymus
36 chr17:46204600-46206400 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr17:46204600-46208800 Weak transcription Adipose Nuclei Adipose
38 chr17:46204600-46209600 Weak transcription Primary T helper cells PMA-I stimulated --
39 chr17:46204600-46209600 Weak transcription Primary T regulatory cells fromperipheralblood blood
40 chr17:46204600-46209600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
41 chr17:46204600-46216600 Weak transcription Primary monocytes fromperipheralblood blood
42 chr17:46204600-46217000 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr17:46204800-46207200 Weak transcription Primary T cells from cord blood blood
44 chr17:46204800-46209600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
45 chr17:46205000-46207400 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr17:46205000-46207400 Weak transcription Primary T cells fromperipheralblood blood
47 chr17:46205000-46214600 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr17:46205000-46215400 Weak transcription Rectal Mucosa Donor 29 rectum
49 chr17:46205000-46216800 Weak transcription Monocytes-CD14+_RO01746 blood
50 chr17:46205000-46217400 Weak transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015