The 2.0 version of rSNPBase

Variant report

Variant rs12455044
Chromosome Location chr18:29692651-29692652
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:29673400-29692800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr18:29673400-29713800 Weak transcription Spleen Spleen
3 chr18:29673800-29702000 Weak transcription Pancreas Pancrea
4 chr18:29673800-29714000 Weak transcription Esophagus oesophagus
5 chr18:29673800-29714200 Weak transcription Ovary ovary
6 chr18:29673800-29715200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr18:29673800-29715200 Weak transcription Lung lung
8 chr18:29673800-29715800 Weak transcription Colonic Mucosa Colon
9 chr18:29673800-29717000 Weak transcription HSMMtube muscle
10 chr18:29674000-29712000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr18:29674200-29692800 Weak transcription HSMM muscle
12 chr18:29674200-29693000 Weak transcription Fetal Muscle Trunk muscle
13 chr18:29674600-29695600 Weak transcription Rectal Smooth Muscle rectum
14 chr18:29674600-29703000 Weak transcription Osteobl bone
15 chr18:29674600-29705600 Weak transcription NHLF lung
16 chr18:29675000-29694600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr18:29675000-29717200 Weak transcription NH-A brain
18 chr18:29675200-29692800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr18:29675400-29693200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr18:29675400-29693200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr18:29676000-29693000 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr18:29676200-29697200 Weak transcription NHDF-Ad bronchial
23 chr18:29676400-29693200 Weak transcription Fetal Lung lung
24 chr18:29676400-29707000 Weak transcription Brain Angular Gyrus brain
25 chr18:29676600-29704800 Weak transcription Brain Inferior Temporal Lobe brain
26 chr18:29676800-29697400 Weak transcription Muscle Satellite Cultured Cells --
27 chr18:29676800-29704600 Weak transcription Fetal Brain Female brain
28 chr18:29676800-29705000 Weak transcription Brain Hippocampus Middle brain
29 chr18:29676800-29717200 Weak transcription Brain Germinal Matrix brain
30 chr18:29677000-29696800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr18:29677000-29713800 Weak transcription Small Intestine intestine
32 chr18:29677000-29715600 Weak transcription Fetal Heart heart
33 chr18:29677000-29717000 Weak transcription Aorta Aorta
34 chr18:29677400-29694600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr18:29678200-29693000 Weak transcription Fetal Muscle Leg muscle
36 chr18:29680000-29693400 Weak transcription A549 lung
37 chr18:29681600-29692800 Weak transcription Liver Liver
38 chr18:29683400-29694800 Weak transcription Hela-S3 cervix
39 chr18:29686200-29693000 Weak transcription Primary T killer memory cells from peripheral blood blood
40 chr18:29687200-29713600 Strong transcription Dnd41 blood
41 chr18:29688000-29695000 Genic enhancers Primary T helper cells PMA-I stimulated --
42 chr18:29688200-29706400 Strong transcription Fetal Thymus thymus
43 chr18:29688200-29712400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr18:29688600-29693600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
45 chr18:29689400-29704600 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr18:29689400-29713600 Strong transcription Monocytes-CD14+_RO01746 blood
47 chr18:29689600-29692800 Weak transcription Primary T regulatory cells fromperipheralblood blood
48 chr18:29689600-29695000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr18:29689800-29692800 Weak transcription Primary T helper naive cells from peripheral blood blood
50 chr18:29689800-29700000 Strong transcription Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015