The 2.0 version of rSNPBase

Variant report

Variant rs3980848
Chromosome Location chr18:29716305-29716306
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:29673800-29717000 Weak transcription HSMMtube muscle
2 chr18:29675000-29717200 Weak transcription NH-A brain
3 chr18:29676800-29717200 Weak transcription Brain Germinal Matrix brain
4 chr18:29677000-29717000 Weak transcription Aorta Aorta
5 chr18:29695800-29717600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr18:29705400-29716400 Weak transcription Stomach Smooth Muscle stomach
7 chr18:29705400-29717800 Weak transcription A549 lung
8 chr18:29706200-29718600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr18:29707400-29718400 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr18:29707800-29717200 Weak transcription HSMM muscle
11 chr18:29709200-29717400 Weak transcription Brain Substantia Nigra brain
12 chr18:29709200-29718200 Weak transcription K562 blood
13 chr18:29709200-29718400 Weak transcription Primary T helper naive cells fromperipheralblood blood
14 chr18:29709200-29718800 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr18:29709600-29716400 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr18:29709600-29719600 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr18:29711600-29718200 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr18:29711600-29718400 Weak transcription Primary T helper cells PMA-I stimulated --
19 chr18:29712000-29718600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr18:29712400-29716400 Weak transcription Primary neutrophils fromperipheralblood blood
21 chr18:29712400-29717200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr18:29712400-29717400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr18:29712400-29718200 Weak transcription Liver Liver
24 chr18:29712400-29718400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr18:29712600-29717000 Weak transcription Fetal Intestine Large intestine
26 chr18:29712600-29717200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr18:29712600-29717600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr18:29712600-29718600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
29 chr18:29713600-29717200 Weak transcription GM12878-XiMat blood
30 chr18:29713600-29717600 Weak transcription Primary B cells from cord blood blood
31 chr18:29713600-29718400 Weak transcription Primary T helper cells fromperipheralblood blood
32 chr18:29713800-29716800 Weak transcription Fetal Adrenal Gland Adrenal Gland
33 chr18:29713800-29716800 Weak transcription Fetal Thymus thymus
34 chr18:29713800-29718200 Weak transcription Primary T cells from cord blood blood
35 chr18:29713800-29718400 Weak transcription Primary hematopoietic stem cells short term culture blood
36 chr18:29714000-29716400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr18:29714200-29718600 Weak transcription Thymus Thymus
38 chr18:29714400-29718400 Weak transcription Primary T cells fromperipheralblood blood
39 chr18:29714800-29718200 Weak transcription Primary hematopoietic stem cells blood
40 chr18:29714800-29720200 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015