Variant report

Variant rs12461701
Chromosome Location chr19:18389620-18389621
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:18366600-18390000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr19:18384600-18389800 Genic enhancers Primary B cells from peripheral blood blood
3 chr19:18385400-18390200 Genic enhancers Spleen Spleen
4 chr19:18386000-18390000 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr19:18388200-18390400 Transcr. at gene 5' and 3' Breast Myoepithelial Primary Cells Breast
6 chr19:18388600-18390200 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr19:18388800-18389800 Enhancers Fetal Heart heart
8 chr19:18388800-18389800 Transcr. at gene 5' and 3' Ovary ovary
9 chr19:18388800-18389800 Enhancers Psoas Muscle Psoas
10 chr19:18388800-18389800 Flanking Active TSS Right Atrium heart
11 chr19:18388800-18390000 Transcr. at gene 5' and 3' H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr19:18388800-18390000 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
13 chr19:18388800-18390000 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr19:18388800-18390000 Genic enhancers Primary mononuclear cells fromperipheralblood Blood
15 chr19:18388800-18390000 Transcr. at gene 5' and 3' Liver Liver
16 chr19:18388800-18390000 Transcr. at gene 5' and 3' Colonic Mucosa Colon
17 chr19:18388800-18390000 Transcr. at gene 5' and 3' Fetal Brain Female brain
18 chr19:18388800-18390000 Transcr. at gene 5' and 3' Rectal Mucosa Donor 29 rectum
19 chr19:18388800-18390000 Transcr. at gene 5' and 3' Hela-S3 cervix
20 chr19:18388800-18390200 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr19:18388800-18390200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr19:18388800-18390200 Transcr. at gene 5' and 3' Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr19:18388800-18390200 Transcr. at gene 5' and 3' Cortex derived primary cultured neurospheres brain
24 chr19:18388800-18390200 Transcr. at gene 5' and 3' Ganglion Eminence derived primary cultured neurospheres brain
25 chr19:18388800-18390200 Transcr. at gene 5' and 3' Adipose Nuclei Adipose
26 chr19:18388800-18390200 Transcr. at gene 5' and 3' Brain Inferior Temporal Lobe brain
27 chr19:18388800-18390200 Transcr. at gene 5' and 3' Fetal Lung lung
28 chr19:18388800-18390200 Transcr. at gene 5' and 3' Pancreas Pancrea
29 chr19:18388800-18390200 Transcr. at gene 5' and 3' Thymus Thymus
30 chr19:18388800-18390200 Transcr. at gene 5' and 3' HSMM muscle
31 chr19:18388800-18390200 Transcr. at gene 5' and 3' K562 blood
32 chr19:18388800-18390200 Transcr. at gene 5' and 3' Monocytes-CD14+_RO01746 blood
33 chr19:18388800-18390200 Transcr. at gene 5' and 3' NHLF lung
34 chr19:18388800-18390200 Transcr. at gene 5' and 3' Osteobl bone
35 chr19:18388800-18390400 Transcr. at gene 5' and 3' Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr19:18388800-18390400 Transcr. at gene 5' and 3' Primary monocytes fromperipheralblood blood
37 chr19:18388800-18390400 Transcr. at gene 5' and 3' Primary T cells from cord blood blood
38 chr19:18388800-18390400 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
39 chr19:18388800-18390400 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
40 chr19:18388800-18390400 Transcr. at gene 5' and 3' Primary T helper cells fromperipheralblood blood
41 chr19:18388800-18390400 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr19:18388800-18390400 Transcr. at gene 5' and 3' Foreskin Melanocyte Primary Cells skin03 Skin
43 chr19:18388800-18390400 Transcr. at gene 5' and 3' Fetal Muscle Trunk muscle
44 chr19:18388800-18390400 Transcr. at gene 5' and 3' Fetal Muscle Leg muscle
45 chr19:18388800-18390400 Transcr. at gene 5' and 3' Placenta Placenta
46 chr19:18388800-18390400 Transcr. at gene 5' and 3' Fetal Thymus thymus
47 chr19:18388800-18390400 Transcr. at gene 5' and 3' Rectal Mucosa Donor 31 rectum
48 chr19:18388800-18390400 Transcr. at gene 5' and 3' A549 lung
49 chr19:18388800-18390400 Transcr. at gene 5' and 3' NHDF-Ad bronchial
50 chr19:18388800-18390600 Transcr. at gene 5' and 3' Fetal Stomach stomach

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