Variant report

Variant rs41347350
Chromosome Location chr19:18389393-18389394
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:18366400-18389400 Weak transcription Fetal Brain Male brain
2 chr19:18366600-18390000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr19:18384600-18389800 Genic enhancers Primary B cells from peripheral blood blood
4 chr19:18385400-18390200 Genic enhancers Spleen Spleen
5 chr19:18385600-18389600 Weak transcription iPS-18 Cell Line embryonic stem cell
6 chr19:18386000-18390000 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr19:18386800-18389600 Weak transcription HSMMtube muscle
8 chr19:18387200-18389600 Weak transcription Placenta Amnion Placenta Amnion
9 chr19:18388200-18389600 Genic enhancers Primary T helper naive cells from peripheral blood blood
10 chr19:18388200-18389600 Genic enhancers Brain Anterior Caudate brain
11 chr19:18388200-18390400 Transcr. at gene 5' and 3' Breast Myoepithelial Primary Cells Breast
12 chr19:18388400-18389600 Genic enhancers Lung lung
13 chr19:18388600-18390200 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr19:18388800-18389400 Enhancers ES-I3 Cell Line embryonic stem cell
15 chr19:18388800-18389400 Genic enhancers HUES48 Cell Line embryonic stem cell
16 chr19:18388800-18389400 Genic enhancers HUES6 Cell Line embryonic stem cell
17 chr19:18388800-18389400 Flanking Active TSS Duodenum Smooth Muscle Duodenum
18 chr19:18388800-18389600 Genic enhancers iPS-20b Cell Line embryonic stem cell
19 chr19:18388800-18389600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr19:18388800-18389600 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
21 chr19:18388800-18389600 Genic enhancers Primary T killer naive cells fromperipheralblood blood
22 chr19:18388800-18389600 Genic enhancers Brain Substantia Nigra brain
23 chr19:18388800-18389600 Genic enhancers Esophagus oesophagus
24 chr19:18388800-18389600 Genic enhancers Left Ventricle heart
25 chr19:18388800-18389600 Genic enhancers Stomach Mucosa stomach
26 chr19:18388800-18389600 Genic enhancers GM12878-XiMat blood
27 chr19:18388800-18389600 Strong transcription NHEK skin
28 chr19:18388800-18389800 Enhancers Fetal Heart heart
29 chr19:18388800-18389800 Transcr. at gene 5' and 3' Ovary ovary
30 chr19:18388800-18389800 Enhancers Psoas Muscle Psoas
31 chr19:18388800-18389800 Flanking Active TSS Right Atrium heart
32 chr19:18388800-18390000 Transcr. at gene 5' and 3' H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr19:18388800-18390000 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
34 chr19:18388800-18390000 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr19:18388800-18390000 Genic enhancers Primary mononuclear cells fromperipheralblood Blood
36 chr19:18388800-18390000 Transcr. at gene 5' and 3' Liver Liver
37 chr19:18388800-18390000 Transcr. at gene 5' and 3' Colonic Mucosa Colon
38 chr19:18388800-18390000 Transcr. at gene 5' and 3' Fetal Brain Female brain
39 chr19:18388800-18390000 Transcr. at gene 5' and 3' Rectal Mucosa Donor 29 rectum
40 chr19:18388800-18390000 Transcr. at gene 5' and 3' Hela-S3 cervix
41 chr19:18388800-18390200 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr19:18388800-18390200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr19:18388800-18390200 Transcr. at gene 5' and 3' Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr19:18388800-18390200 Transcr. at gene 5' and 3' Cortex derived primary cultured neurospheres brain
45 chr19:18388800-18390200 Transcr. at gene 5' and 3' Ganglion Eminence derived primary cultured neurospheres brain
46 chr19:18388800-18390200 Transcr. at gene 5' and 3' Adipose Nuclei Adipose
47 chr19:18388800-18390200 Transcr. at gene 5' and 3' Brain Inferior Temporal Lobe brain
48 chr19:18388800-18390200 Transcr. at gene 5' and 3' Fetal Lung lung
49 chr19:18388800-18390200 Transcr. at gene 5' and 3' Pancreas Pancrea
50 chr19:18388800-18390200 Transcr. at gene 5' and 3' Thymus Thymus

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