Variant report

Variant rs12462758
Chromosome Location chr19:52439687-52439688
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:52431200-52440400 Weak transcription Fetal Heart heart
2 chr19:52431400-52453200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr19:52431600-52443400 Weak transcription K562 blood
4 chr19:52431800-52440200 Weak transcription HUVEC blood vessel
5 chr19:52431800-52441600 Weak transcription NHLF lung
6 chr19:52432000-52440000 Weak transcription Stomach Mucosa stomach
7 chr19:52432000-52444600 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr19:52432200-52443400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr19:52432200-52450800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr19:52432600-52452800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr19:52432800-52439800 Strong transcription iPS-20b Cell Line embryonic stem cell
12 chr19:52432800-52449400 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
13 chr19:52432800-52453000 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
14 chr19:52433000-52441200 Strong transcription Fetal Stomach stomach
15 chr19:52433000-52449000 ZNF genes & repeats Primary monocytes fromperipheralblood blood
16 chr19:52433000-52449400 ZNF genes & repeats Primary hematopoietic stem cells blood
17 chr19:52433000-52449600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr19:52433000-52452800 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
19 chr19:52433000-52453000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr19:52433000-52453400 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
21 chr19:52433000-52455400 ZNF genes & repeats Liver Liver
22 chr19:52433000-52455400 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
23 chr19:52433200-52440000 Strong transcription Fetal Muscle Leg muscle
24 chr19:52433200-52442400 ZNF genes & repeats Primary T cells from cord blood blood
25 chr19:52433200-52443000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr19:52434000-52442000 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
27 chr19:52434000-52442000 ZNF genes & repeats Primary mononuclear cells fromperipheralblood Blood
28 chr19:52434000-52442400 Strong transcription Fetal Muscle Trunk muscle
29 chr19:52434200-52449200 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
30 chr19:52434400-52440000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr19:52434600-52441200 Strong transcription Brain Germinal Matrix brain
32 chr19:52434800-52442000 ZNF genes & repeats Lung lung
33 chr19:52434800-52449000 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
34 chr19:52435000-52441800 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
35 chr19:52435000-52441800 ZNF genes & repeats Fetal Intestine Small intestine
36 chr19:52435000-52441800 ZNF genes & repeats Sigmoid Colon Sigmoid Colon
37 chr19:52435000-52442000 ZNF genes & repeats Primary T helper memory cells from peripheral blood 1 blood
38 chr19:52435000-52448600 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
39 chr19:52435000-52449000 ZNF genes & repeats Ovary ovary
40 chr19:52435000-52455800 ZNF genes & repeats Adipose Nuclei Adipose
41 chr19:52435200-52440800 ZNF genes & repeats Primary T helper 17 cells PMA-I stimulated --
42 chr19:52435200-52441600 Strong transcription HUES64 Cell Line embryonic stem cell
43 chr19:52435200-52441800 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
44 chr19:52435200-52444400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr19:52435200-52449400 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
46 chr19:52435400-52440600 Strong transcription iPS-15b Cell Line embryonic stem cell
47 chr19:52435400-52442200 Strong transcription H9 Cell Line embryonic stem cell
48 chr19:52435600-52448800 ZNF genes & repeats Primary T cells fromperipheralblood blood
49 chr19:52435800-52447600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr19:52436400-52441200 Strong transcription Psoas Muscle Psoas

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