Variant report

Variant rs56945014
Chromosome Location chr19:52436172-52436173
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:52431200-52440400 Weak transcription Fetal Heart heart
2 chr19:52431400-52436200 Weak transcription HSMMtube muscle
3 chr19:52431400-52453200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr19:52431600-52438000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr19:52431600-52443400 Weak transcription K562 blood
6 chr19:52431800-52436200 Weak transcription HMEC breast
7 chr19:52431800-52436400 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr19:52431800-52438000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr19:52431800-52438000 Weak transcription NHEK skin
10 chr19:52431800-52438200 Weak transcription Right Atrium heart
11 chr19:52431800-52438600 Weak transcription Fetal Kidney kidney
12 chr19:52431800-52439200 Weak transcription NHDF-Ad bronchial
13 chr19:52431800-52440200 Weak transcription HUVEC blood vessel
14 chr19:52431800-52441600 Weak transcription NHLF lung
15 chr19:52432000-52437800 Weak transcription Fetal Brain Female brain
16 chr19:52432000-52438000 Weak transcription Brain Inferior Temporal Lobe brain
17 chr19:52432000-52440000 Weak transcription Stomach Mucosa stomach
18 chr19:52432000-52444600 Weak transcription ES-WA7 Cell Line embryonic stem cell
19 chr19:52432200-52438000 Weak transcription Brain Cingulate Gyrus brain
20 chr19:52432200-52438600 Weak transcription Fetal Brain Male brain
21 chr19:52432200-52443400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
22 chr19:52432200-52450800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr19:52432400-52438000 Weak transcription HepG2 liver
24 chr19:52432600-52452800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr19:52432800-52437200 Strong transcription Skeletal Muscle Female skeletal muscle
26 chr19:52432800-52439800 Strong transcription iPS-20b Cell Line embryonic stem cell
27 chr19:52432800-52449400 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
28 chr19:52432800-52453000 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
29 chr19:52433000-52436200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr19:52433000-52436600 Strong transcription Brain Substantia Nigra brain
31 chr19:52433000-52436600 Strong transcription HSMM muscle
32 chr19:52433000-52437000 ZNF genes & repeats Primary B cells from cord blood blood
33 chr19:52433000-52437200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr19:52433000-52437200 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr19:52433000-52437200 ZNF genes & repeats GM12878-XiMat blood
36 chr19:52433000-52437400 Strong transcription Primary T helper naive cells fromperipheralblood blood
37 chr19:52433000-52437600 ZNF genes & repeats Fetal Intestine Large intestine
38 chr19:52433000-52437800 Strong transcription H1 Cell Line embryonic stem cell
39 chr19:52433000-52438000 Strong transcription Fetal Lung lung
40 chr19:52433000-52438400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
41 chr19:52433000-52438400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr19:52433000-52441200 Strong transcription Fetal Stomach stomach
43 chr19:52433000-52449000 ZNF genes & repeats Primary monocytes fromperipheralblood blood
44 chr19:52433000-52449400 ZNF genes & repeats Primary hematopoietic stem cells blood
45 chr19:52433000-52449600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr19:52433000-52452800 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
47 chr19:52433000-52453000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr19:52433000-52453400 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
49 chr19:52433000-52455400 ZNF genes & repeats Liver Liver
50 chr19:52433000-52455400 ZNF genes & repeats Monocytes-CD14+_RO01746 blood

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