Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:84859668..84862400-chr1:84868271..84869833,2	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10493747	0.86[EUR][1000 genomes]
rs10874438	0.91[EUR][1000 genomes]
rs11163962	0.89[EUR][1000 genomes]
rs12049602	0.89[EUR][1000 genomes]
rs12118984	0.86[EUR][1000 genomes]
rs12406723	0.89[EUR][1000 genomes]
rs1246330	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1588037	0.91[EUR][1000 genomes]
rs500565	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs558268	0.87[EUR][1000 genomes]
rs646681	0.83[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs647065	0.89[ASN][1000 genomes]
rs6576704	0.87[EUR][1000 genomes]
rs6661172	0.92[EUR][1000 genomes]
rs667923	0.93[EUR][1000 genomes]
rs679152	0.92[EUR][1000 genomes]
rs7511984	0.92[EUR][1000 genomes]
rs7512262	0.89[EUR][1000 genomes]
rs7514601	0.86[EUR][1000 genomes]
rs7515964	0.86[EUR][1000 genomes]
rs7541465	0.89[EUR][1000 genomes]
rs7547088	0.86[EUR][1000 genomes]
rs7548231	0.88[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830437	chr1:84837524-85001269	Flanking Active TSS Active TSS Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:84858000-84863200	Weak transcription	Cortex derived primary cultured neurospheres	brain

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