The 2.0 version of rSNPBase

Variant report

Variant rs12487516
Chromosome Location chr3:121585601-121585602
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:121554800-121604000 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr3:121555000-121592600 Weak transcription Skeletal Muscle Female skeletal muscle
3 chr3:121555000-121593400 Weak transcription Liver Liver
4 chr3:121555200-121592000 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr3:121555600-121586200 Weak transcription Brain Cingulate Gyrus brain
6 chr3:121555600-121593800 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr3:121555800-121615600 Weak transcription Primary T cells from cord blood blood
8 chr3:121556600-121591400 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr3:121559200-121613200 Weak transcription Brain Angular Gyrus brain
10 chr3:121570200-121586000 Weak transcription Pancreas Pancrea
11 chr3:121571400-121604200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr3:121574600-121593200 Weak transcription HepG2 liver
13 chr3:121574800-121586200 Weak transcription Primary T helper cells PMA-I stimulated --
14 chr3:121575800-121586000 Weak transcription Fetal Muscle Trunk muscle
15 chr3:121581000-121588200 Strong transcription Primary B cells from peripheral blood blood
16 chr3:121582400-121586600 Weak transcription Spleen Spleen
17 chr3:121582600-121586200 Weak transcription Thymus Thymus
18 chr3:121582600-121586800 Strong transcription Primary hematopoietic stem cells short term culture blood
19 chr3:121582600-121591400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr3:121582600-121591800 Weak transcription Lung lung
21 chr3:121582800-121587000 Strong transcription GM12878-XiMat blood
22 chr3:121583200-121586600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr3:121583200-121586600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr3:121583200-121586600 Weak transcription Fetal Intestine Small intestine
25 chr3:121583200-121593000 Weak transcription Brain Anterior Caudate brain
26 chr3:121583200-121593400 Weak transcription Dnd41 blood
27 chr3:121583200-121597600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr3:121583400-121612400 Weak transcription Cortex derived primary cultured neurospheres brain
29 chr3:121584200-121586800 Strong transcription Primary monocytes fromperipheralblood blood
30 chr3:121584600-121586800 Strong transcription Monocytes-CD14+_RO01746 blood
31 chr3:121585000-121588600 Weak transcription Primary B cells from cord blood blood
32 chr3:121585000-121591400 Weak transcription Primary hematopoietic stem cells blood
33 chr3:121585000-121607600 Weak transcription Aorta Aorta
34 chr3:121585000-121613200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr3:121585200-121591600 Weak transcription Duodenum Mucosa Duodenum
36 chr3:121585200-121591800 Weak transcription Primary neutrophils fromperipheralblood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015