Variant report

Variant	rs12497646
Chromosome Location	chr3:159432971-159432972
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs11705997	0.89[EUR][1000 genomes]
rs11719460	0.90[EUR][1000 genomes]
rs13059769	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1497763	0.91[EUR][1000 genomes]
rs16830643	0.86[EUR][1000 genomes]
rs2366268	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6790484	0.96[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs961156	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9845025	0.84[EUR][1000 genomes]
rs9845408	0.84[EUR][1000 genomes]
rs9865997	0.89[EUR][1000 genomes]
rs9869674	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9872731	0.85[EUR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:159430000-159441400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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