Variant report

Variant rs12509955
Chromosome Location chr4:10024303-10024304
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:10020200-10024600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
2 chr4:10021000-10024800 Enhancers Lung lung
3 chr4:10021200-10025600 Enhancers Primary B cells from cord blood blood
4 chr4:10021200-10025800 Enhancers Fetal Adrenal Gland Adrenal Gland
5 chr4:10021200-10026400 Enhancers Primary Natural Killer cells fromperipheralblood blood
6 chr4:10021200-10027400 Enhancers Right Atrium heart
7 chr4:10021400-10024800 Enhancers Left Ventricle heart
8 chr4:10021400-10025200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr4:10021400-10025200 Weak transcription NH-A brain
10 chr4:10021400-10026200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr4:10021400-10026200 Enhancers Adipose Nuclei Adipose
12 chr4:10021400-10026400 Enhancers Fetal Muscle Leg muscle
13 chr4:10021400-10029600 Weak transcription A549 lung
14 chr4:10021400-10032000 Weak transcription HSMMtube muscle
15 chr4:10021600-10025200 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr4:10021600-10026000 Enhancers Right Ventricle heart
17 chr4:10021600-10026000 Enhancers Skeletal Muscle Female skeletal muscle
18 chr4:10021600-10035200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr4:10021800-10032000 Weak transcription Fetal Heart heart
20 chr4:10022200-10025000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr4:10022200-10025200 Enhancers Spleen Spleen
22 chr4:10022200-10025400 Enhancers Primary hematopoietic stem cells short term culture blood
23 chr4:10022600-10024800 Enhancers Primary neutrophils fromperipheralblood blood
24 chr4:10022600-10024800 Enhancers Fetal Thymus thymus
25 chr4:10022600-10025000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr4:10022600-10025800 Enhancers Primary B cells from peripheral blood blood
27 chr4:10022800-10024400 Enhancers Brain Hippocampus Middle brain
28 chr4:10023000-10026000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr4:10023000-10026000 Enhancers Fetal Muscle Trunk muscle
30 chr4:10023000-10026000 Enhancers Skeletal Muscle Male skeletal muscle
31 chr4:10023000-10026400 Enhancers Placenta Placenta
32 chr4:10023000-10030400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
33 chr4:10023200-10024400 Enhancers Duodenum Smooth Muscle Duodenum
34 chr4:10023200-10025200 Weak transcription Colonic Mucosa Colon
35 chr4:10023200-10025800 Enhancers Esophagus oesophagus
36 chr4:10023200-10025800 Weak transcription HSMM muscle
37 chr4:10023200-10027400 Enhancers Breast Myoepithelial Primary Cells Breast
38 chr4:10023400-10024600 Enhancers Brain Substantia Nigra brain
39 chr4:10023400-10025600 Weak transcription Muscle Satellite Cultured Cells --
40 chr4:10023400-10026000 Enhancers Liver Liver
41 chr4:10023400-10026200 Enhancers HMEC breast
42 chr4:10023400-10027400 Enhancers HepG2 liver
43 chr4:10023400-10027800 Enhancers Primary monocytes fromperipheralblood blood
44 chr4:10023600-10025200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr4:10023600-10026000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr4:10023600-10026000 Enhancers NHEK skin
47 chr4:10023600-10026200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr4:10023600-10026600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr4:10023800-10024400 Enhancers Brain Anterior Caudate brain
50 chr4:10024000-10024800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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