Variant report

Variant rs13111638
Chromosome Location chr4:9996890-9996891
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:9977800-10003600 Weak transcription Fetal Muscle Leg muscle
2 chr4:9980800-10007200 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr4:9982800-10002800 Weak transcription Gastric stomach
4 chr4:9985800-9997400 Strong transcription HMEC breast
5 chr4:9987600-9998000 Weak transcription Ovary ovary
6 chr4:9987600-10008000 Weak transcription Stomach Smooth Muscle stomach
7 chr4:9989200-9999600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr4:9989600-9997600 Strong transcription HepG2 liver
9 chr4:9989600-9997800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr4:9989600-9998800 Strong transcription Breast Myoepithelial Primary Cells Breast
11 chr4:9990000-9997600 Weak transcription Stomach Mucosa stomach
12 chr4:9990400-9999600 Weak transcription Fetal Stomach stomach
13 chr4:9991400-10001400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr4:9991600-9999000 Strong transcription NHEK skin
15 chr4:9991600-10007200 Weak transcription Colon Smooth Muscle Colon
16 chr4:9991800-9998000 Weak transcription Right Ventricle heart
17 chr4:9992400-10006800 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr4:9992600-9997800 Weak transcription Brain Anterior Caudate brain
19 chr4:9992600-10007200 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr4:9992800-9997400 Weak transcription Brain Substantia Nigra brain
21 chr4:9992800-9997800 Weak transcription Brain Cingulate Gyrus brain
22 chr4:9993000-10006800 Strong transcription Primary monocytes fromperipheralblood blood
23 chr4:9993200-10006800 Strong transcription Monocytes-CD14+_RO01746 blood
24 chr4:9993600-10008000 Weak transcription Left Ventricle heart
25 chr4:9993800-9998200 Strong transcription Liver Liver
26 chr4:9995200-9999200 Genic enhancers Fetal Intestine Small intestine
27 chr4:9995400-9998000 Genic enhancers Fetal Intestine Large intestine
28 chr4:9995400-9998000 Weak transcription Lung lung
29 chr4:9995600-9998000 Weak transcription Pancreas Pancrea
30 chr4:9996200-9997000 Enhancers Colonic Mucosa Colon
31 chr4:9996200-9997800 Weak transcription Esophagus oesophagus
32 chr4:9996400-9997000 ZNF genes & repeats Aorta Aorta
33 chr4:9996400-9999000 Enhancers Sigmoid Colon Sigmoid Colon
34 chr4:9996600-9997000 Enhancers Small Intestine intestine
35 chr4:9996600-9997200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
36 chr4:9996800-9997800 Weak transcription GM12878-XiMat blood
37 chr4:9996800-9999000 Enhancers Duodenum Mucosa Duodenum
38 chr4:9996800-9999000 Enhancers Rectal Mucosa Donor 29 rectum
39 chr4:9996800-9999200 Enhancers Rectal Mucosa Donor 31 rectum

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