Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:75317317..75319096-chr5:75327045..75329051,2	K562	blood:

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10038280	0.85[EUR][1000 genomes]
rs10038757	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10043369	0.86[EUR][1000 genomes]
rs10050813	0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10054931	0.86[EUR][1000 genomes]
rs10063621	0.88[EUR][1000 genomes]
rs10064145	0.86[EUR][1000 genomes]
rs10065114	0.87[EUR][1000 genomes]
rs10474460	0.85[EUR][1000 genomes]
rs12513447	0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12656979	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1553311	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs17673786	0.87[EUR][1000 genomes]
rs17746749	0.87[EUR][1000 genomes]
rs1862520	0.87[EUR][1000 genomes]
rs28554027	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6453199	0.85[EUR][1000 genomes]
rs7448740	0.81[AFR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs767590	0.87[EUR][1000 genomes]
rs7700761	0.88[EUR][1000 genomes]
rs7702044	0.87[EUR][1000 genomes]
rs7711218	0.87[EUR][1000 genomes]
rs7712198	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7725280	0.86[EUR][1000 genomes]
rs9293666	0.86[EUR][1000 genomes]
rs9293667	0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1027368	chr5:74759999-75663712	Active TSS Strong transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
2	nsv518475	chr5:74863041-75411804	Strong transcription Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:75327000-75327400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr5:75327000-75327400	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr5:75327000-75327400	Enhancers	Pancreas	Pancrea

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