The 2.0 version of rSNPBase

Variant report

Variant rs12517628
Chromosome Location chr5:35669803-35669804
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:27 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:35618600-35678000 Weak transcription Left Ventricle heart
2 chr5:35630600-35707600 Weak transcription Pancreas Pancrea
3 chr5:35634800-35673200 Weak transcription Brain Anterior Caudate brain
4 chr5:35642600-35673000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr5:35645200-35673600 Weak transcription Fetal Kidney kidney
6 chr5:35651200-35673000 Weak transcription Ovary ovary
7 chr5:35656400-35670600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
8 chr5:35657400-35673000 Weak transcription Fetal Heart heart
9 chr5:35665400-35671000 Weak transcription Primary hematopoietic stem cells blood
10 chr5:35665600-35677800 Weak transcription Primary monocytes fromperipheralblood blood
11 chr5:35665800-35670200 Weak transcription Dnd41 blood
12 chr5:35667800-35672400 Weak transcription Fetal Lung lung
13 chr5:35668200-35670800 Enhancers Primary T cells from cord blood blood
14 chr5:35668600-35671600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr5:35668600-35675000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
16 chr5:35668600-35675800 Enhancers Primary hematopoietic stem cells short term culture blood
17 chr5:35669000-35670800 Enhancers Primary T helper naive cells from peripheral blood blood
18 chr5:35669000-35671800 Enhancers Primary T helper naive cells fromperipheralblood blood
19 chr5:35669000-35675000 Enhancers Primary T helper cells fromperipheralblood blood
20 chr5:35669200-35670200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr5:35669200-35674800 Enhancers Primary T helper 17 cells PMA-I stimulated --
22 chr5:35669200-35675000 Enhancers Primary T killer memory cells from peripheral blood blood
23 chr5:35669600-35670000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr5:35669600-35670400 Strong transcription Breast Myoepithelial Primary Cells Breast
25 chr5:35669600-35671600 Enhancers Primary T helper cells PMA-I stimulated --
26 chr5:35669800-35670000 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
27 chr5:35669800-35670200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015