Variant report

Variant	rs1255734
Chromosome Location	chr14:64018812-64018813
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:64011188..64013753-chr14:64017649..64019673,2	K562	blood:
2	chr14:64010795..64013799-chr14:64014716..64019149,4	K562	blood:

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10129182	1.00[ASN][1000 genomes]
rs10135999	1.00[ASN][1000 genomes]
rs11158494	1.00[ASN][1000 genomes]
rs1255724	1.00[ASN][1000 genomes]
rs1255728	1.00[ASN][1000 genomes]
rs1255729	1.00[ASN][1000 genomes]
rs1255732	0.98[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs1255736	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1255744	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1255745	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1255747	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1255783	1.00[ASN][1000 genomes]
rs17101259	1.00[ASN][1000 genomes]
rs28420069	1.00[ASN][1000 genomes]
rs28607114	1.00[ASN][1000 genomes]
rs28708979	1.00[ASN][1000 genomes]
rs28744493	1.00[ASN][1000 genomes]
rs61983965	1.00[ASN][1000 genomes]
rs61995015	1.00[ASN][1000 genomes]
rs6573515	1.00[ASN][1000 genomes]
rs7141832	1.00[ASN][1000 genomes]
rs7150291	1.00[ASN][1000 genomes]
rs7150490	1.00[ASN][1000 genomes]
rs7156664	1.00[ASN][1000 genomes]
rs73278655	1.00[ASN][1000 genomes]
rs74056132	1.00[ASN][1000 genomes]
rs74056138	1.00[ASN][1000 genomes]
rs74056139	1.00[ASN][1000 genomes]
rs74056141	1.00[ASN][1000 genomes]
rs8003274	1.00[ASN][1000 genomes]
rs8005767	1.00[ASN][1000 genomes]
rs8009130	1.00[ASN][1000 genomes]
rs8017413	1.00[ASN][1000 genomes]
rs8021183	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv527251	chr14:63400786-64068806	Flanking Bivalent TSS/Enh Weak transcription Strong transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
2	nsv520528	chr14:63400786-64157117	Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
3	nsv530774	chr14:63591348-64029881	Active TSS Strong transcription Weak transcription Enhancers Flanking Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
4	nsv915909	chr14:63620440-64560369	Active TSS Genic enhancers Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	67 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:64011000-64021600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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