The 2.0 version of rSNPBase

Variant report

Variant rs12563337
Chromosome Location chr1:59237028-59237029
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:59226600-59239000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:59229000-59238600 Weak transcription Stomach Mucosa stomach
3 chr1:59229200-59238800 Weak transcription Liver Liver
4 chr1:59229400-59238800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:59229400-59238800 Weak transcription Right Ventricle heart
6 chr1:59229400-59239000 Weak transcription Duodenum Mucosa Duodenum
7 chr1:59230000-59238800 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr1:59230400-59238800 Weak transcription Colon Smooth Muscle Colon
9 chr1:59230600-59238800 Weak transcription Rectal Smooth Muscle rectum
10 chr1:59231000-59238800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr1:59231400-59238800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr1:59231600-59238000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr1:59233200-59238200 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr1:59233200-59238600 Weak transcription Fetal Heart heart
15 chr1:59233200-59238800 Weak transcription Psoas Muscle Psoas
16 chr1:59234800-59238800 Weak transcription Left Ventricle heart
17 chr1:59234800-59239000 Weak transcription iPS-15b Cell Line embryonic stem cell
18 chr1:59235000-59238200 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr1:59235000-59238800 Weak transcription Brain Cingulate Gyrus brain
20 chr1:59235000-59238800 Weak transcription Fetal Intestine Large intestine
21 chr1:59235000-59239000 Weak transcription ES-WA7 Cell Line embryonic stem cell
22 chr1:59235000-59239000 Weak transcription HUES6 Cell Line embryonic stem cell
23 chr1:59235000-59239200 Weak transcription HUES48 Cell Line embryonic stem cell
24 chr1:59235000-59245600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr1:59235200-59238000 Weak transcription Stomach Smooth Muscle stomach
26 chr1:59235200-59239000 Weak transcription Primary T cells fromperipheralblood blood
27 chr1:59235400-59238800 Weak transcription NHLF lung
28 chr1:59235600-59238200 Weak transcription HUVEC blood vessel
29 chr1:59235600-59238600 Weak transcription Muscle Satellite Cultured Cells --
30 chr1:59235600-59238600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr1:59235600-59238800 Weak transcription HSMM muscle
32 chr1:59235600-59238800 Weak transcription NH-A brain
33 chr1:59235800-59238600 Weak transcription HepG2 liver
34 chr1:59235800-59238800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr1:59235800-59239000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr1:59235800-59239000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr1:59235800-59239000 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr1:59235800-59239000 Weak transcription Fetal Brain Female brain
39 chr1:59235800-59239000 Weak transcription Ovary ovary
40 chr1:59235800-59239000 Weak transcription HMEC breast
41 chr1:59236000-59238800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr1:59236000-59238800 Weak transcription Thymus Thymus
43 chr1:59236000-59239000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr1:59236200-59238200 Weak transcription NHDF-Ad bronchial
45 chr1:59236200-59239000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr1:59236200-59245600 Weak transcription Fetal Brain Male brain
47 chr1:59236400-59239000 Weak transcription NHEK skin

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Last update: Aug 31, 2015