The 2.0 version of rSNPBase

Variant report

Variant rs12563863
Chromosome Location chr1:63145690-63145691
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:63107400-63151200 Weak transcription Pancreas Pancrea
2 chr1:63107600-63147800 Weak transcription NHEK skin
3 chr1:63108800-63151200 Weak transcription Fetal Stomach stomach
4 chr1:63109000-63147800 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr1:63109200-63150200 Weak transcription Fetal Brain Male brain
6 chr1:63111400-63150200 Weak transcription Fetal Lung lung
7 chr1:63112400-63152400 Weak transcription Fetal Muscle Trunk muscle
8 chr1:63113600-63151000 Weak transcription Primary hematopoietic stem cells blood
9 chr1:63113600-63152800 Weak transcription Primary B cells from cord blood blood
10 chr1:63118000-63150800 Weak transcription Duodenum Mucosa Duodenum
11 chr1:63118200-63147600 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr1:63119000-63148000 Weak transcription Fetal Brain Female brain
13 chr1:63119800-63150200 Weak transcription Adipose Nuclei Adipose
14 chr1:63123000-63147800 Weak transcription Gastric stomach
15 chr1:63126800-63147800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr1:63128800-63147400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr1:63128800-63150800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr1:63131200-63149200 Weak transcription Fetal Intestine Small intestine
19 chr1:63133000-63147600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr1:63137400-63147800 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr1:63138000-63153000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr1:63138400-63151000 Weak transcription Fetal Intestine Large intestine
23 chr1:63138600-63150800 Weak transcription Fetal Adrenal Gland Adrenal Gland
24 chr1:63138800-63148200 Weak transcription Rectal Smooth Muscle rectum
25 chr1:63138800-63150000 Weak transcription Stomach Mucosa stomach
26 chr1:63140800-63148000 Weak transcription Brain Germinal Matrix brain
27 chr1:63141400-63152600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr1:63141600-63149000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr1:63142000-63147600 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr1:63142600-63147800 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr1:63142800-63147400 Weak transcription Brain Anterior Caudate brain
32 chr1:63142800-63147600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr1:63142800-63152400 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr1:63143000-63147600 Weak transcription HUES64 Cell Line embryonic stem cell
35 chr1:63143000-63147600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr1:63143000-63147800 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr1:63143000-63148200 Weak transcription HUES6 Cell Line embryonic stem cell
38 chr1:63143000-63150800 Weak transcription Ovary ovary
39 chr1:63143000-63151400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr1:63143000-63152400 Weak transcription H9 Cell Line embryonic stem cell
41 chr1:63143000-63153000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
42 chr1:63143200-63147400 Weak transcription iPS-15b Cell Line embryonic stem cell
43 chr1:63143200-63147800 Weak transcription H1 Cell Line embryonic stem cell
44 chr1:63143200-63147800 Weak transcription HUES48 Cell Line embryonic stem cell
45 chr1:63143200-63147800 Weak transcription iPS-18 Cell Line embryonic stem cell
46 chr1:63143200-63147800 Weak transcription iPS-20b Cell Line embryonic stem cell
47 chr1:63143200-63148000 Weak transcription ES-WA7 Cell Line embryonic stem cell
48 chr1:63143200-63148000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr1:63143200-63148000 Weak transcription HSMM muscle
50 chr1:63143200-63148200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015