The 2.0 version of rSNPBase

Variant report

Variant rs59505425
Chromosome Location chr1:63037279-63037280
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:62939600-63040600 Weak transcription Aorta Aorta
2 chr1:62939800-63044400 Weak transcription Placenta Amnion Placenta Amnion
3 chr1:62939800-63060200 Weak transcription Small Intestine intestine
4 chr1:62954000-63053400 Weak transcription Fetal Brain Male brain
5 chr1:62957800-63050200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr1:62958200-63061000 Weak transcription Lung lung
7 chr1:62994000-63051000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr1:63000200-63054400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr1:63003000-63037400 Weak transcription iPS-20b Cell Line embryonic stem cell
10 chr1:63003200-63045200 Weak transcription Gastric stomach
11 chr1:63005400-63037400 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr1:63005400-63037400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr1:63005600-63050200 Weak transcription NHLF lung
14 chr1:63007200-63056200 Weak transcription Brain Anterior Caudate brain
15 chr1:63007200-63096200 Weak transcription HUVEC blood vessel
16 chr1:63007600-63040400 Weak transcription Fetal Muscle Trunk muscle
17 chr1:63007800-63037400 Weak transcription Left Ventricle heart
18 chr1:63007800-63040600 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr1:63008400-63038000 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr1:63008400-63053200 Weak transcription Osteobl bone
21 chr1:63008600-63037400 Weak transcription Primary hematopoietic stem cells short term culture blood
22 chr1:63009600-63037800 Weak transcription HSMM muscle
23 chr1:63010800-63078400 Weak transcription A549 lung
24 chr1:63017800-63057600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr1:63018000-63051200 Weak transcription Colonic Mucosa Colon
26 chr1:63019800-63052400 Weak transcription HMEC breast
27 chr1:63021600-63037400 Weak transcription Ovary ovary
28 chr1:63021600-63058800 Weak transcription Stomach Smooth Muscle stomach
29 chr1:63021600-63061400 Weak transcription Pancreas Pancrea
30 chr1:63021800-63037800 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr1:63021800-63038000 Weak transcription Dnd41 blood
32 chr1:63021800-63038600 Weak transcription NHDF-Ad bronchial
33 chr1:63024400-63053200 Weak transcription NH-A brain
34 chr1:63025000-63043600 Weak transcription Thymus Thymus
35 chr1:63025800-63038200 Weak transcription Psoas Muscle Psoas
36 chr1:63026400-63052200 Weak transcription Primary B cells from cord blood blood
37 chr1:63026400-63053400 Weak transcription Primary T cells from cord blood blood
38 chr1:63026800-63037400 Weak transcription Duodenum Mucosa Duodenum
39 chr1:63026800-63037800 Weak transcription Fetal Muscle Leg muscle
40 chr1:63026800-63050200 Weak transcription HSMMtube muscle
41 chr1:63027000-63037400 Weak transcription Cortex derived primary cultured neurospheres brain
42 chr1:63027000-63039000 Weak transcription Brain Hippocampus Middle brain
43 chr1:63027000-63040800 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr1:63027000-63051400 Weak transcription Placenta Placenta
45 chr1:63027200-63039800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr1:63027200-63050400 Weak transcription Muscle Satellite Cultured Cells --
47 chr1:63027400-63038000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr1:63028800-63037400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr1:63028800-63052800 Weak transcription Esophagus oesophagus
50 chr1:63029000-63037600 Weak transcription Fetal Intestine Large intestine

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Last update: Aug 31, 2015