Variant report

Variant	rs36157139
Chromosome Location	chr6:147260665-147260666
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:147255677..147257632-chr6:147259181..147261185,2	K562	blood:

Extended variants
information (count: 49 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:46)

rs_ID	r²[population]
rs10493323	1.00[EUR][1000 genomes]
rs10493325	1.00[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs1168121	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12563308	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12563863	1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12565895	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12566265	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1408480	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17123615	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17123688	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17123694	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17123705	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17123712	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17123721	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17123725	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17123740	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17123743	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2016736	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs34898550	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3737890	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs55709519	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs56094630	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56193814	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs56792530	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57022388	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs59505425	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs59662235	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59816054	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60339595	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs610248	1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs61308091	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61501887	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs74076653	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs74076654	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs74076668	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs74076670	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs74076686	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs74076689	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs74076691	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs74076695	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs74076699	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74076907	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs74076909	1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs74078610	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74078643	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs74078661	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830838	chr6:147090745-147274669	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS ZNF genes & repeats Strong transcription Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
2	esv2760996	chr6:147229457-147269633	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
3	esv1846046	chr6:147258908-147271295	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:147260600-147261200	Enhancers	Primary neutrophils fromperipheralblood	blood

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