Variant report
Variant | rs12573461 |
---|---|
Chromosome Location | chr10:45194499-45194500 |
allele | A/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs11239211 | 0.93[ASN][1000 genomes] |
rs11813749 | 1.00[EUR][1000 genomes] |
rs12098746 | 0.92[ASN][1000 genomes] |
rs12569373 | 1.00[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs12569566 | 0.92[ASN][1000 genomes] |
rs12569644 | 1.00[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs12569855 | 0.94[ASN][1000 genomes] |
rs12570026 | 1.00[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs12570392 | 1.00[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs12570753 | 1.00[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs12571227 | 1.00[EUR][1000 genomes] |
rs12571338 | 1.00[EUR][1000 genomes] |
rs12571649 | 1.00[EUR][1000 genomes] |
rs12572145 | 1.00[EUR][1000 genomes] |
rs12572451 | 1.00[EUR][1000 genomes] |
rs12572524 | 0.83[ASN][1000 genomes] |
rs12572644 | 0.87[ASN][1000 genomes] |
rs12572976 | 1.00[EUR][1000 genomes] |
rs12764414 | 0.94[ASN][1000 genomes] |
rs12771080 | 0.94[ASN][1000 genomes] |
rs12783832 | 0.91[ASN][1000 genomes] |
rs1325169 | 1.00[EUR][1000 genomes] |
rs1383374 | 0.94[ASN][1000 genomes] |
rs1573903 | 1.00[EUR][1000 genomes] |
rs17157167 | 1.00[EUR][1000 genomes] |
rs35018589 | 0.94[ASN][1000 genomes] |
rs35054029 | 0.92[ASN][1000 genomes] |
rs35392689 | 0.92[ASN][1000 genomes] |
rs55689732 | 1.00[EUR][1000 genomes] |
rs57657317 | 1.00[EUR][1000 genomes] |
rs59114620 | 1.00[EUR][1000 genomes] |
rs60493254 | 1.00[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs60593524 | 1.00[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs7070865 | 0.94[ASN][1000 genomes] |
rs7076300 | 0.83[ASN][1000 genomes] |
rs7094529 | 0.94[ASN][1000 genomes] |
rs71494742 | 0.94[ASN][1000 genomes] |
rs73275080 | 1.00[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv2422287 | chr10:45044161-45257684 | Active TSS Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Genic enhancers Strong transcription | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
2 | nsv831843 | chr10:45084703-45280032 | Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr10:45192800-45195200 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
2 | chr10:45193000-45195200 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
3 | chr10:45194000-45194600 | Enhancers | Fetal Muscle Leg | muscle |