Variant report
| Variant | rs12580320 |
|---|---|
| Chromosome Location | chr12:45796112-45796113 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:45744800-45809200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 2 | chr12:45752200-45803800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 3 | chr12:45752200-45809200 | Weak transcription | Small Intestine | intestine |
| 4 | chr12:45759000-45805200 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 5 | chr12:45759200-45822600 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 6 | chr12:45759400-45796200 | Weak transcription | Brain Hippocampus Middle | brain |
| 7 | chr12:45760600-45798000 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 8 | chr12:45764400-45802800 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 9 | chr12:45764400-45821000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 10 | chr12:45764600-45815400 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 11 | chr12:45772600-45815400 | Weak transcription | K562 | blood |
| 12 | chr12:45773400-45803800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 13 | chr12:45774800-45811400 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 14 | chr12:45778800-45803400 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 15 | chr12:45780400-45796800 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 16 | chr12:45780400-45829800 | Weak transcription | Brain Anterior Caudate | brain |
| 17 | chr12:45780800-45802000 | Weak transcription | Right Ventricle | heart |
| 18 | chr12:45782400-45797200 | Weak transcription | Aorta | Aorta |
| 19 | chr12:45783200-45818800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 20 | chr12:45783400-45826400 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 21 | chr12:45783600-45799800 | Weak transcription | HepG2 | liver |
| 22 | chr12:45785600-45796400 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 23 | chr12:45786000-45797200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 24 | chr12:45786000-45799800 | Weak transcription | Primary hematopoietic stem cells | blood |
| 25 | chr12:45786000-45800800 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 26 | chr12:45786200-45797200 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 27 | chr12:45786200-45801000 | Weak transcription | Psoas Muscle | Psoas |
| 28 | chr12:45786200-45801200 | Weak transcription | Spleen | Spleen |
| 29 | chr12:45786200-45805400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 30 | chr12:45786200-45806200 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 31 | chr12:45786200-45809200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 32 | chr12:45786400-45806200 | Weak transcription | Esophagus | oesophagus |
| 33 | chr12:45786600-45796200 | Weak transcription | Stomach Smooth Muscle | stomach |
| 34 | chr12:45786600-45796400 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 35 | chr12:45786600-45796600 | Weak transcription | GM12878-XiMat | blood |
| 36 | chr12:45786600-45803600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 37 | chr12:45786600-45803800 | Weak transcription | Gastric | stomach |
| 38 | chr12:45786600-45806000 | Weak transcription | Ovary | ovary |
| 39 | chr12:45786600-45827000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 40 | chr12:45786800-45797200 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 41 | chr12:45787000-45797200 | Weak transcription | Primary B cells from cord blood | blood |
| 42 | chr12:45787000-45797200 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 43 | chr12:45787000-45798200 | Weak transcription | Fetal Intestine Small | intestine |
| 44 | chr12:45787200-45796200 | Weak transcription | Fetal Muscle Leg | muscle |
| 45 | chr12:45790600-45797200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 46 | chr12:45792000-45798600 | Strong transcription | Liver | Liver |
| 47 | chr12:45792000-45799800 | Strong transcription | Skeletal Muscle Female | skeletal muscle |
| 48 | chr12:45792000-45828600 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 49 | chr12:45792200-45802000 | Strong transcription | Adipose Nuclei | Adipose |
| 50 | chr12:45792600-45798400 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
