Variant report

Variant rs12592577
Chromosome Location chr15:92425123-92425124
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:92404400-92433600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr15:92409600-92430800 Weak transcription Colon Smooth Muscle Colon
3 chr15:92410600-92445400 Weak transcription Aorta Aorta
4 chr15:92411200-92430600 Weak transcription Colonic Mucosa Colon
5 chr15:92411200-92431000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr15:92411600-92430600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr15:92411600-92430600 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr15:92412000-92425200 Weak transcription Stomach Smooth Muscle stomach
9 chr15:92412000-92425800 Weak transcription Lung lung
10 chr15:92412000-92426200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr15:92414800-92425200 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr15:92414800-92429600 Weak transcription Ovary ovary
13 chr15:92415000-92432600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr15:92416200-92428400 Weak transcription Esophagus oesophagus
15 chr15:92416400-92428000 Weak transcription Fetal Stomach stomach
16 chr15:92416600-92431000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr15:92416800-92430600 Weak transcription HMEC breast
18 chr15:92416800-92431000 Weak transcription NHEK skin
19 chr15:92418000-92435400 Weak transcription Primary neutrophils fromperipheralblood blood
20 chr15:92418200-92425200 Enhancers Fetal Heart heart
21 chr15:92418400-92428200 Weak transcription Spleen Spleen
22 chr15:92418400-92430400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
23 chr15:92418400-92435800 Weak transcription Primary T cells from cord blood blood
24 chr15:92419000-92426200 Weak transcription Primary monocytes fromperipheralblood blood
25 chr15:92419000-92428200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
26 chr15:92419600-92428600 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr15:92419600-92430400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr15:92420200-92429200 Weak transcription Primary T cells fromperipheralblood blood
29 chr15:92420800-92426600 Weak transcription Monocytes-CD14+_RO01746 blood
30 chr15:92421400-92426400 Enhancers Brain Substantia Nigra brain
31 chr15:92421400-92430400 Enhancers Brain Hippocampus Middle brain
32 chr15:92421600-92426400 Weak transcription Right Atrium heart
33 chr15:92422400-92426400 Weak transcription Right Ventricle heart
34 chr15:92422400-92429200 Weak transcription Adipose Nuclei Adipose
35 chr15:92422400-92430400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr15:92422600-92429200 Weak transcription Fetal Brain Female brain
37 chr15:92423600-92425800 Enhancers Brain Angular Gyrus brain
38 chr15:92423600-92427200 Enhancers Brain Inferior Temporal Lobe brain
39 chr15:92423600-92435800 Enhancers Brain Cingulate Gyrus brain
40 chr15:92424000-92425200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr15:92424000-92425600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
42 chr15:92424000-92427400 Enhancers Brain Anterior Caudate brain
43 chr15:92424200-92425200 Enhancers Left Ventricle heart
44 chr15:92424200-92425600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
45 chr15:92424200-92426200 Enhancers iPS-18 Cell Line embryonic stem cell
46 chr15:92424200-92430800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
47 chr15:92424400-92425400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr15:92424400-92425600 Enhancers H1 Cell Line embryonic stem cell
49 chr15:92424400-92425600 Enhancers HUES48 Cell Line embryonic stem cell
50 chr15:92424400-92426600 Weak transcription Fetal Brain Male brain

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