The 2.0 version of rSNPBase

Variant report

Variant rs12593456
Chromosome Location chr15:99831722-99831723
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:99792200-99846400 Weak transcription Lung lung
2 chr15:99792600-99832200 Weak transcription Aorta Aorta
3 chr15:99792800-99847000 Weak transcription Right Ventricle heart
4 chr15:99793000-99838000 Weak transcription Rectal Smooth Muscle rectum
5 chr15:99793000-99850400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr15:99793000-99866600 Weak transcription Gastric stomach
7 chr15:99794000-99840000 Weak transcription Brain Anterior Caudate brain
8 chr15:99794000-99846400 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr15:99794200-99834600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr15:99794200-99847000 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr15:99794400-99845200 Weak transcription HSMMtube muscle
12 chr15:99798000-99838200 Weak transcription Primary T cells fromperipheralblood blood
13 chr15:99798400-99834600 Weak transcription HSMM muscle
14 chr15:99799400-99838200 Weak transcription Fetal Lung lung
15 chr15:99800000-99834000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr15:99803200-99832200 Weak transcription Fetal Stomach stomach
17 chr15:99808800-99845200 Weak transcription Fetal Kidney kidney
18 chr15:99809000-99846400 Weak transcription Pancreas Pancrea
19 chr15:99809000-99846400 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr15:99814200-99838400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr15:99816200-99832200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr15:99816400-99838800 Weak transcription Primary B cells from peripheral blood blood
23 chr15:99816800-99846400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr15:99817000-99845000 Weak transcription Stomach Smooth Muscle stomach
25 chr15:99817200-99834000 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr15:99817200-99834400 Weak transcription Brain Angular Gyrus brain
27 chr15:99819400-99834600 Weak transcription Primary B cells from cord blood blood
28 chr15:99819600-99838200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
29 chr15:99819800-99854800 Weak transcription Primary T helper cells fromperipheralblood blood
30 chr15:99820000-99834600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr15:99820000-99836400 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr15:99820000-99836400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
33 chr15:99820200-99832000 Weak transcription Primary T cells from cord blood blood
34 chr15:99820200-99832200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr15:99820600-99833800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr15:99822600-99834400 Weak transcription HepG2 liver
37 chr15:99822800-99832000 Weak transcription GM12878-XiMat blood
38 chr15:99823000-99831800 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr15:99823000-99834400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr15:99823000-99838200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr15:99823000-99841800 Weak transcription Small Intestine intestine
42 chr15:99823000-99846200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr15:99823800-99836600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr15:99824000-99847000 Weak transcription Spleen Spleen
45 chr15:99824400-99833800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr15:99824400-99835600 Weak transcription Fetal Brain Male brain
47 chr15:99824400-99837000 Weak transcription Brain Inferior Temporal Lobe brain
48 chr15:99824400-99838200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr15:99824400-99845600 Weak transcription Muscle Satellite Cultured Cells --
50 chr15:99824600-99832000 Weak transcription HUVEC blood vessel

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Last update: Aug 31, 2015