The 2.0 version of rSNPBase

Variant report

Variant rs12617862
Chromosome Location chr2:173085728-173085729
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:21 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:173077600-173087200 Weak transcription Thymus Thymus
2 chr2:173079800-173092000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr2:173082200-173090600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr2:173082200-173090600 Weak transcription HMEC breast
5 chr2:173082200-173092000 Weak transcription Esophagus oesophagus
6 chr2:173082600-173087200 Weak transcription Fetal Thymus thymus
7 chr2:173083200-173092400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr2:173083400-173086600 Enhancers Primary hematopoietic stem cells short term culture blood
9 chr2:173084200-173088400 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr2:173084400-173085800 Enhancers Primary T cells from cord blood blood
11 chr2:173084600-173086400 Enhancers Primary hematopoietic stem cells blood
12 chr2:173084600-173086800 Enhancers Primary T helper cells PMA-I stimulated --
13 chr2:173084800-173087000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
14 chr2:173085000-173086000 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr2:173085000-173086000 Weak transcription Primary T helper naive cells fromperipheralblood blood
16 chr2:173085000-173086000 Weak transcription Primary T helper cells fromperipheralblood blood
17 chr2:173085200-173087600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr2:173085200-173087600 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr2:173085400-173087800 Weak transcription Primary neutrophils fromperipheralblood blood
20 chr2:173085600-173087400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
21 chr2:173085600-173087600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood

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Last update: Aug 31, 2015