Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:128165113..128167879-chr5:128172954..128174842,2	K562	blood:

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs1181981	0.95[JPT][hapmap]
rs1181984	0.95[JPT][hapmap]
rs1181987	0.95[JPT][hapmap]
rs1181988	0.95[JPT][hapmap]
rs1181989	0.95[JPT][hapmap]
rs1181990	0.95[JPT][hapmap]
rs11952278	0.82[AMR][1000 genomes]
rs12657219	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17699243	0.95[JPT][hapmap]
rs17699303	0.95[JPT][hapmap]
rs181958	0.95[JPT][hapmap]
rs2108972	0.90[AMR][1000 genomes]
rs257907	0.95[JPT][hapmap]
rs257998	0.95[JPT][hapmap]
rs258005	0.95[JPT][hapmap]
rs258007	0.90[JPT][hapmap]
rs2871598	0.96[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs3932768	0.95[JPT][hapmap]
rs51668	0.90[JPT][hapmap]
rs58038005	1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs61348502	0.98[AMR][1000 genomes];0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6859755	0.81[JPT][hapmap]
rs719570	0.96[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72663365	0.96[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs759139	0.95[JPT][hapmap]
rs759140	0.95[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1023405	chr5:127955360-128190069	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:128157600-128172400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr5:128162200-128182800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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