Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs1181981	0.88[JPT][hapmap]
rs1181984	0.88[JPT][hapmap]
rs1181987	0.90[JPT][hapmap]
rs1181988	0.90[JPT][hapmap]
rs1181989	0.90[JPT][hapmap]
rs1181990	0.89[JPT][hapmap]
rs11952278	0.81[AMR][1000 genomes]
rs12653731	0.96[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12657219	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs17699243	0.88[JPT][hapmap]
rs17699303	0.88[JPT][hapmap]
rs181958	0.88[JPT][hapmap]
rs2108972	0.86[AMR][1000 genomes]
rs257907	0.90[JPT][hapmap]
rs257998	0.89[JPT][hapmap]
rs258005	0.89[JPT][hapmap]
rs258007	0.84[JPT][hapmap]
rs2871598	0.92[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs3932768	0.89[JPT][hapmap]
rs51668	0.84[JPT][hapmap]
rs58038005	0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs61348502	0.94[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs72663365	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs759139	0.90[JPT][hapmap]
rs759140	0.89[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv599699	chr5:128172808-128259451	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv462443	chr5:128172808-128298437	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
3	nsv599700	chr5:128172808-128298437	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:128193400-128199800	Weak transcription	Fetal Stomach	stomach
2	chr5:128194200-128205600	Weak transcription	Fetal Heart	heart

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