Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:25631774..25634150-chr7:25636240..25639148,2	K562	blood:

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10486406	0.86[ASN][1000 genomes]
rs10951078	0.86[ASN][1000 genomes]
rs11973605	0.81[CHD][hapmap]
rs11973866	0.85[ASN][1000 genomes]
rs11978307	0.86[ASN][1000 genomes]
rs12534245	0.84[ASN][1000 genomes]
rs12670768	0.82[CHB][hapmap];0.93[CHD][hapmap];0.95[JPT][hapmap];0.86[ASN][1000 genomes]
rs1354264	0.86[ASN][1000 genomes]
rs1502948	0.91[ASN][1000 genomes]
rs1553399	0.86[ASN][1000 genomes]
rs16873895	0.82[CHB][hapmap];0.93[CHD][hapmap];0.95[JPT][hapmap];0.86[ASN][1000 genomes]
rs16873899	0.86[ASN][1000 genomes]
rs16873909	0.82[ASN][1000 genomes]
rs17151997	0.83[ASN][1000 genomes]
rs17152030	0.90[ASN][1000 genomes]
rs17152036	0.90[ASN][1000 genomes]
rs17152043	0.82[ASN][1000 genomes]
rs17152054	0.85[ASN][1000 genomes]
rs17152061	0.85[ASN][1000 genomes]
rs1818146	0.81[CHB][hapmap];0.95[JPT][hapmap];0.86[ASN][1000 genomes]
rs1882526	0.84[ASN][1000 genomes]
rs1995438	0.91[ASN][1000 genomes]
rs2134479	0.87[ASN][1000 genomes]
rs2214240	0.82[ASN][1000 genomes]
rs28723687	0.82[ASN][1000 genomes]
rs2952523	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2960821	0.88[CHD][hapmap];0.95[JPT][hapmap];0.80[ASN][1000 genomes]
rs62454590	0.80[ASN][1000 genomes]
rs62454591	0.86[ASN][1000 genomes]
rs62454592	0.86[ASN][1000 genomes]
rs62454635	0.90[ASN][1000 genomes]
rs73085996	0.85[ASN][1000 genomes]
rs739622	0.86[ASN][1000 genomes]
rs975369	0.85[JPT][hapmap];0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1016813	chr7:25405859-26150509	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	108 gene(s)	inside rSNPs	diseases
2	nsv538803	chr7:25405859-26150509	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	108 gene(s)	inside rSNPs	diseases
3	esv2753823	chr7:25626156-25655093	Enhancers Active TSS Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:25631600-25634800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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