Variant report
Variant | rs12676897 |
---|---|
Chromosome Location | chr8:91297889-91297890 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:3)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:3 , 50 per page) page:
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rs_ID | r2[population] |
---|---|
rs10086980 | 0.88[CEU][hapmap];0.90[EUR][1000 genomes] |
rs12679936 | 0.85[EUR][1000 genomes] |
rs13276534 | 0.90[EUR][1000 genomes] |
rs13439055 | 0.87[EUR][1000 genomes] |
rs16904163 | 0.85[EUR][1000 genomes] |
rs2056839 | 0.82[CEU][hapmap] |
rs2056840 | 0.82[CEU][hapmap] |
rs2158222 | 0.88[CEU][hapmap];0.85[EUR][1000 genomes] |
rs2339108 | 0.82[CEU][hapmap] |
rs2339109 | 0.88[CEU][hapmap];0.85[EUR][1000 genomes] |
rs28465357 | 0.90[EUR][1000 genomes] |
rs2879344 | 0.86[EUR][1000 genomes] |
rs33958462 | 0.90[EUR][1000 genomes] |
rs62530359 | 0.85[EUR][1000 genomes] |
rs62532282 | 0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs9642892 | 0.90[EUR][1000 genomes] |
rs9643256 | 0.83[CEU][hapmap];0.90[EUR][1000 genomes] |
rs9643257 | 0.90[EUR][1000 genomes] |
rs9643260 | 0.83[EUR][1000 genomes] |
rs968950 | 0.82[CEU][hapmap] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv2758164 | chr8:91000786-91329669 | Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 18 gene(s) | inside rSNPs | diseases |
2 | esv2759628 | chr8:91000786-91329669 | Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 18 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr8:91296400-91299800 | Strong transcription | K562 | blood |