Variant report

Variant rs12685564
Chromosome Location chr9:103358050-103358051
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:103329600-103360800 Weak transcription Aorta Aorta
2 chr9:103331600-103360200 Weak transcription Breast Myoepithelial Primary Cells Breast
3 chr9:103333600-103360800 Weak transcription Fetal Brain Male brain
4 chr9:103343200-103360600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
5 chr9:103346200-103359800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr9:103348600-103361000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr9:103348800-103360600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr9:103349600-103360800 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr9:103349800-103359400 Weak transcription Brain Germinal Matrix brain
10 chr9:103350000-103360200 Weak transcription H9 Cell Line embryonic stem cell
11 chr9:103350200-103360200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr9:103350400-103359200 Weak transcription Fetal Heart heart
13 chr9:103350400-103360000 Weak transcription H1 Cell Line embryonic stem cell
14 chr9:103350600-103360800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chr9:103351000-103360000 Weak transcription iPS-18 Cell Line embryonic stem cell
16 chr9:103351000-103360600 Weak transcription HUES64 Cell Line embryonic stem cell
17 chr9:103351600-103360600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr9:103353400-103360600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr9:103353600-103360400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
20 chr9:103354000-103360800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr9:103354400-103359600 Weak transcription Brain Hippocampus Middle brain
22 chr9:103354400-103360800 Weak transcription Brain Substantia Nigra brain
23 chr9:103354600-103360800 Weak transcription Fetal Adrenal Gland Adrenal Gland
24 chr9:103354800-103360200 Weak transcription HepG2 liver
25 chr9:103357400-103358400 Enhancers Brain Angular Gyrus brain
26 chr9:103357600-103358400 Enhancers Brain Cingulate Gyrus brain
27 chr9:103357600-103358400 Enhancers Brain Inferior Temporal Lobe brain
28 chr9:103357800-103358400 Enhancers NH-A brain
29 chr9:103358000-103358400 Weak transcription iPS-15b Cell Line embryonic stem cell
30 chr9:103358000-103359600 Weak transcription HSMM muscle
31 chr9:103358000-103360000 Weak transcription HUES48 Cell Line embryonic stem cell
32 chr9:103358000-103360400 Weak transcription ES-I3 Cell Line embryonic stem cell
33 chr9:103358000-103360400 Weak transcription HUES6 Cell Line embryonic stem cell
34 chr9:103358000-103360400 Weak transcription Fetal Lung lung
35 chr9:103358000-103360600 Weak transcription Brain Anterior Caudate brain
36 chr9:103358000-103360600 Weak transcription Rectal Smooth Muscle rectum
37 chr9:103358000-103360600 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr9:103358000-103360800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr9:103358000-103360800 Weak transcription Fetal Brain Female brain
40 chr9:103358000-103360800 Weak transcription Skeletal Muscle Female skeletal muscle
41 chr9:103358000-103360800 Weak transcription HSMMtube muscle

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