The 2.0 version of rSNPBase

Variant report

Variant rs12693574
Chromosome Location chr2:191294114-191294115
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:191273800-191301400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr2:191274800-191300800 Weak transcription Stomach Smooth Muscle stomach
3 chr2:191278600-191301200 Weak transcription Pancreas Pancrea
4 chr2:191278800-191300800 Weak transcription Fetal Thymus thymus
5 chr2:191278800-191301200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr2:191279000-191296800 Weak transcription Duodenum Mucosa Duodenum
7 chr2:191279000-191300800 Weak transcription Esophagus oesophagus
8 chr2:191279200-191303000 Weak transcription NHEK skin
9 chr2:191279400-191296400 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr2:191280400-191296400 Weak transcription Spleen Spleen
11 chr2:191280800-191296400 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr2:191281400-191296800 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr2:191281400-191298600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr2:191281800-191296800 Weak transcription Small Intestine intestine
15 chr2:191282200-191296800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
16 chr2:191282400-191297000 Weak transcription Ovary ovary
17 chr2:191282600-191297000 Weak transcription Fetal Muscle Leg muscle
18 chr2:191282800-191301200 Weak transcription Fetal Brain Male brain
19 chr2:191283200-191301000 Weak transcription Fetal Muscle Trunk muscle
20 chr2:191284000-191296400 Weak transcription Primary B cells from peripheral blood blood
21 chr2:191284200-191296400 Weak transcription Left Ventricle heart
22 chr2:191284200-191301000 Weak transcription Gastric stomach
23 chr2:191284200-191301200 Weak transcription Right Ventricle heart
24 chr2:191284200-191311000 Weak transcription Psoas Muscle Psoas
25 chr2:191284400-191296400 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr2:191285600-191301000 Weak transcription Colon Smooth Muscle Colon
27 chr2:191287000-191300800 Weak transcription Brain Germinal Matrix brain
28 chr2:191290400-191301200 Weak transcription Brain Anterior Caudate brain
29 chr2:191290800-191300800 Weak transcription Brain Cingulate Gyrus brain
30 chr2:191291000-191296800 Weak transcription K562 blood
31 chr2:191291600-191299800 Weak transcription Primary monocytes fromperipheralblood blood
32 chr2:191292000-191296600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
33 chr2:191292000-191296800 Weak transcription Thymus Thymus
34 chr2:191292200-191296200 Weak transcription Primary T helper cells fromperipheralblood blood
35 chr2:191292200-191296400 Weak transcription Primary T helper cells PMA-I stimulated --
36 chr2:191292200-191296400 Weak transcription GM12878-XiMat blood
37 chr2:191292200-191296600 Weak transcription Primary hematopoietic stem cells short term culture blood
38 chr2:191292200-191296600 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr2:191292200-191296800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr2:191292200-191297000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
41 chr2:191292200-191297000 Weak transcription Aorta Aorta
42 chr2:191292200-191298600 Weak transcription Lung lung
43 chr2:191292200-191299600 Weak transcription Monocytes-CD14+_RO01746 blood
44 chr2:191292200-191300800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr2:191292200-191301000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr2:191292400-191296400 Weak transcription Primary hematopoietic stem cells blood
47 chr2:191292400-191296400 Weak transcription Primary T helper naive cells from peripheral blood blood
48 chr2:191292400-191296800 Weak transcription Breast Myoepithelial Primary Cells Breast
49 chr2:191292800-191294200 Enhancers Primary T killer naive cells fromperipheralblood blood
50 chr2:191292800-191296800 Weak transcription Fetal Stomach stomach

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Last update: Aug 31, 2015