The 2.0 version of rSNPBase

Variant report

Variant rs7557681
Chromosome Location chr2:191290745-191290746
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:191273800-191301400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr2:191274200-191291600 Weak transcription Fetal Stomach stomach
3 chr2:191274600-191291400 Weak transcription Fetal Intestine Large intestine
4 chr2:191274800-191300800 Weak transcription Stomach Smooth Muscle stomach
5 chr2:191277400-191291400 Weak transcription Fetal Intestine Small intestine
6 chr2:191278400-191291200 Weak transcription Fetal Brain Female brain
7 chr2:191278400-191291600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
8 chr2:191278600-191301200 Weak transcription Pancreas Pancrea
9 chr2:191278800-191300800 Weak transcription Fetal Thymus thymus
10 chr2:191278800-191301200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr2:191279000-191296800 Weak transcription Duodenum Mucosa Duodenum
12 chr2:191279000-191300800 Weak transcription Esophagus oesophagus
13 chr2:191279200-191303000 Weak transcription NHEK skin
14 chr2:191279400-191296400 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr2:191280400-191291400 Weak transcription Thymus Thymus
16 chr2:191280400-191296400 Weak transcription Spleen Spleen
17 chr2:191280800-191296400 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr2:191281400-191291600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr2:191281400-191292800 Weak transcription Dnd41 blood
20 chr2:191281400-191296800 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr2:191281400-191298600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr2:191281800-191296800 Weak transcription Small Intestine intestine
23 chr2:191282200-191296800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
24 chr2:191282400-191297000 Weak transcription Ovary ovary
25 chr2:191282600-191297000 Weak transcription Fetal Muscle Leg muscle
26 chr2:191282800-191301200 Weak transcription Fetal Brain Male brain
27 chr2:191283000-191292800 Weak transcription Brain Inferior Temporal Lobe brain
28 chr2:191283200-191301000 Weak transcription Fetal Muscle Trunk muscle
29 chr2:191284000-191296400 Weak transcription Primary B cells from peripheral blood blood
30 chr2:191284200-191291600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr2:191284200-191291600 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr2:191284200-191296400 Weak transcription Left Ventricle heart
33 chr2:191284200-191301000 Weak transcription Gastric stomach
34 chr2:191284200-191301200 Weak transcription Right Ventricle heart
35 chr2:191284200-191311000 Weak transcription Psoas Muscle Psoas
36 chr2:191284400-191291600 Weak transcription Primary hematopoietic stem cells blood
37 chr2:191284400-191296400 Weak transcription Primary T regulatory cells fromperipheralblood blood
38 chr2:191284800-191291600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
39 chr2:191285200-191291600 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr2:191285600-191301000 Weak transcription Colon Smooth Muscle Colon
41 chr2:191285800-191291200 Weak transcription GM12878-XiMat blood
42 chr2:191286000-191291600 Weak transcription Pancreatic Islets Pancreatic Islet
43 chr2:191286600-191291400 Weak transcription Primary T cells fromperipheralblood blood
44 chr2:191287000-191300800 Weak transcription Brain Germinal Matrix brain
45 chr2:191287200-191291800 Enhancers Primary T killer naive cells fromperipheralblood blood
46 chr2:191288800-191291000 Enhancers Primary T helper cells fromperipheralblood blood
47 chr2:191289400-191290800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr2:191289400-191291400 Enhancers Primary T helper naive cells fromperipheralblood blood
49 chr2:191289400-191291400 Enhancers Primary T helper cells PMA-I stimulated --
50 chr2:191289400-191292000 Enhancers Primary T helper memory cells from peripheral blood 2 blood

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Last update: Aug 31, 2015