The 2.0 version of rSNPBase

Variant report

Variant rs12720570
Chromosome Location chr1:186895190-186895191
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:186854000-186897200 Weak transcription Lung lung
2 chr1:186864600-186897000 Weak transcription Esophagus oesophagus
3 chr1:186868800-186897000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr1:186869000-186896600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr1:186871400-186904000 Weak transcription Hela-S3 cervix
6 chr1:186873800-186896800 Weak transcription Small Intestine intestine
7 chr1:186881800-186896800 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr1:186881800-186933600 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr1:186881800-186951200 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr1:186883800-186906800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
11 chr1:186888800-186897000 Weak transcription Primary neutrophils fromperipheralblood blood
12 chr1:186890000-186924400 Weak transcription Fetal Stomach stomach
13 chr1:186890400-186895200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr1:186890800-186928400 Strong transcription Monocytes-CD14+_RO01746 blood
15 chr1:186891800-186895600 Weak transcription Aorta Aorta
16 chr1:186892800-186896800 Weak transcription Duodenum Mucosa Duodenum
17 chr1:186892800-186924000 Strong transcription Primary monocytes fromperipheralblood blood
18 chr1:186893000-186895800 Weak transcription Stomach Mucosa stomach
19 chr1:186893000-186896400 Weak transcription NHEK skin
20 chr1:186893200-186895600 Weak transcription Fetal Intestine Large intestine
21 chr1:186894200-186896000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr1:186894200-186896200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr1:186894400-186896200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr1:186894600-186895200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
25 chr1:186894600-186895200 Enhancers Colon Smooth Muscle Colon
26 chr1:186894600-186895400 Enhancers Primary hematopoietic stem cells short term culture blood
27 chr1:186894600-186895800 Enhancers NHDF-Ad bronchial
28 chr1:186894600-186896000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr1:186894600-186897400 Enhancers Breast Myoepithelial Primary Cells Breast
30 chr1:186894800-186895400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr1:186894800-186895400 Enhancers Rectal Smooth Muscle rectum
32 chr1:186894800-186895400 Enhancers Osteobl bone
33 chr1:186894800-186896400 Enhancers Adipose Nuclei Adipose
34 chr1:186895000-186895200 Enhancers Fetal Intestine Small intestine
35 chr1:186895000-186895200 Enhancers HUVEC blood vessel
36 chr1:186895000-186895400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr1:186895000-186895400 Enhancers Brain Hippocampus Middle brain
38 chr1:186895000-186895600 Enhancers Primary hematopoietic stem cells blood
39 chr1:186895000-186895800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr1:186895000-186895800 Enhancers Cortex derived primary cultured neurospheres brain
41 chr1:186895000-186897600 Enhancers Placenta Amnion Placenta Amnion

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015