Variant report

Variant	rs12744849
Chromosome Location	chr1:165427563-165427564
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10753678	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12726616	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1467664	0.86[CEU][hapmap];0.80[CHB][hapmap];0.95[JPT][hapmap];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs157880	0.89[JPT][hapmap]
rs166899	0.89[JPT][hapmap]
rs285428	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs285429	0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs517456	0.90[JPT][hapmap]
rs878179	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:165422200-165433200	Weak transcription	Right Ventricle	heart
2	chr1:165424000-165434800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr1:165426200-165428200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr1:165426600-165430000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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