Variant report

Variant	rs1467664
Chromosome Location	chr1:165414933-165414934
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10753678	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12726616	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12744849	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs157880	0.95[JPT][hapmap]
rs166899	0.95[JPT][hapmap]
rs1831002	0.81[ASN][1000 genomes]
rs285428	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs285429	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs517456	0.95[JPT][hapmap]
rs878179	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:165413800-165415000	Enhancers	Spleen	Spleen
2	chr1:165414000-165415200	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr1:165414200-165415000	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
4	chr1:165414200-165415600	Bivalent Enhancer	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr1:165414400-165415200	Enhancers	Fetal Heart	heart
6	chr1:165414600-165415000	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr1:165414600-165415000	Active TSS	Fetal Muscle Trunk	muscle
8	chr1:165414600-165415000	Enhancers	Lung	lung
9	chr1:165414600-165415000	Bivalent/Poised TSS	Stomach Smooth Muscle	stomach
10	chr1:165414600-165415800	Bivalent Enhancer	ES-UCSF4 Cell Line	embryonic stem cell
11	chr1:165414800-165415000	Bivalent Enhancer	ES-I3 Cell Line	embryonic stem cell
12	chr1:165414800-165415000	Flanking Bivalent TSS/Enh	iPS-15b Cell Line	embryonic stem cell
13	chr1:165414800-165415000	Flanking Bivalent TSS/Enh	iPS-20b Cell Line	embryonic stem cell
14	chr1:165414800-165415000	Bivalent Enhancer	Primary T helper cells PMA-I stimulated	--
15	chr1:165414800-165415000	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr1:165414800-165415000	Bivalent Enhancer	Cortex derived primary cultured neurospheres	brain
17	chr1:165414800-165415000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
18	chr1:165414800-165415000	Bivalent Enhancer	Foreskin Keratinocyte Primary Cells skin03	Skin
19	chr1:165414800-165415000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
20	chr1:165414800-165415000	Enhancers	Brain Anterior Caudate	brain
21	chr1:165414800-165415000	Bivalent Enhancer	Brain Inferior Temporal Lobe	brain
22	chr1:165414800-165415000	Flanking Active TSS	Fetal Lung	lung
23	chr1:165414800-165415000	Enhancers	Right Ventricle	heart
24	chr1:165414800-165415400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
25	chr1:165414800-165415600	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
26	chr1:165414800-165415800	Bivalent Enhancer	Fetal Muscle Leg	muscle

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