Variant report

Variant	rs1831002
Chromosome Location	chr1:165409735-165409736
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs113471	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1467664	0.81[ASN][1000 genomes]
rs157875	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs157876	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs157880	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs157881	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs157883	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs166897	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs166899	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs463638	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs517456	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:165398200-165412200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr1:165403400-165410600	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr1:165403800-165412400	Weak transcription	Brain Substantia Nigra	brain
4	chr1:165406400-165410200	Weak transcription	Brain Anterior Caudate	brain
5	chr1:165406600-165410400	Weak transcription	Psoas Muscle	Psoas
6	chr1:165407000-165410400	Weak transcription	Skeletal Muscle Female	skeletal muscle
7	chr1:165408400-165412400	Enhancers	Fetal Muscle Leg	muscle
8	chr1:165408600-165411600	Enhancers	Fetal Lung	lung
9	chr1:165409000-165410200	Weak transcription	Brain Germinal Matrix	brain
10	chr1:165409000-165410400	Weak transcription	Fetal Muscle Trunk	muscle
11	chr1:165409000-165410400	Weak transcription	Lung	lung
12	chr1:165409000-165411000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr1:165409200-165410600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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