The 2.0 version of rSNPBase

Variant report

Variant rs157875
Chromosome Location chr1:165393389-165393390
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:165376400-165393400 Weak transcription Brain Hippocampus Middle brain
2 chr1:165378000-165399600 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr1:165379400-165393800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr1:165380400-165394000 Weak transcription Right Ventricle heart
5 chr1:165385600-165393600 Weak transcription Brain Inferior Temporal Lobe brain
6 chr1:165389200-165393600 Weak transcription Right Atrium heart
7 chr1:165389200-165393800 Weak transcription Left Ventricle heart
8 chr1:165389400-165394000 Weak transcription Fetal Intestine Small intestine
9 chr1:165390200-165393600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr1:165391200-165393800 Enhancers Skeletal Muscle Male skeletal muscle
11 chr1:165391400-165393800 Enhancers Skeletal Muscle Female skeletal muscle
12 chr1:165392000-165393400 Enhancers Adipose Nuclei Adipose
13 chr1:165392000-165393400 Enhancers Fetal Lung lung
14 chr1:165392200-165393400 Enhancers Primary T helper naive cells from peripheral blood blood
15 chr1:165392200-165393400 Enhancers Primary T helper cells fromperipheralblood blood
16 chr1:165392200-165393600 Enhancers Primary T cells fromperipheralblood blood
17 chr1:165392200-165393600 Enhancers Primary T helper naive cells fromperipheralblood blood
18 chr1:165392200-165393600 Enhancers Brain Anterior Caudate brain
19 chr1:165392200-165393600 Enhancers Ovary ovary
20 chr1:165392400-165393400 Enhancers Primary T helper cells PMA-I stimulated --
21 chr1:165392400-165393400 Weak transcription Stomach Smooth Muscle stomach
22 chr1:165392400-165393600 Enhancers Fetal Muscle Leg muscle
23 chr1:165392600-165393400 Enhancers Primary T helper 17 cells PMA-I stimulated --
24 chr1:165392600-165393400 Weak transcription Brain Cingulate Gyrus brain
25 chr1:165392600-165393600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
26 chr1:165392600-165393800 Enhancers Primary T killer naive cells fromperipheralblood blood
27 chr1:165392600-165394600 Enhancers Placenta Placenta
28 chr1:165392800-165393400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
29 chr1:165392800-165393400 Weak transcription Brain Substantia Nigra brain
30 chr1:165392800-165393800 Weak transcription Colonic Mucosa Colon
31 chr1:165392800-165393800 Weak transcription Esophagus oesophagus
32 chr1:165392800-165393800 Weak transcription Fetal Muscle Trunk muscle
33 chr1:165392800-165393800 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr1:165392800-165394000 Weak transcription Lung lung
35 chr1:165393000-165393400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr1:165393000-165393400 Enhancers Primary T killer memory cells from peripheral blood blood
37 chr1:165393000-165394000 Weak transcription Spleen Spleen
38 chr1:165393200-165393400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
39 chr1:165393200-165393400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr1:165393200-165393600 Enhancers Primary T regulatory cells fromperipheralblood blood
41 chr1:165393200-165393600 Enhancers Duodenum Mucosa Duodenum
42 chr1:165393200-165393600 Weak transcription Psoas Muscle Psoas
43 chr1:165393200-165393800 Enhancers Liver Liver
44 chr1:165393200-165394200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr1:165393200-165394400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
46 chr1:165393200-165394600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr1:165393200-165394600 Enhancers Primary monocytes fromperipheralblood blood
48 chr1:165393200-165394600 Enhancers Primary Natural Killer cells fromperipheralblood blood
49 chr1:165393200-165395200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015