Variant report

Variant	rs12758361
Chromosome Location	chr1:47334857-47334858
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10493125	0.83[AMR][1000 genomes]
rs11211375	0.88[EUR][1000 genomes]
rs11211411	0.80[EUR][1000 genomes]
rs11211412	0.80[EUR][1000 genomes]
rs12117798	0.80[EUR][1000 genomes]
rs12126734	0.80[EUR][1000 genomes]
rs12142787	0.85[EUR][1000 genomes]
rs12742610	0.85[EUR][1000 genomes]
rs35947953	0.88[EUR][1000 genomes]
rs66871510	0.85[EUR][1000 genomes]
rs72681937	0.88[EUR][1000 genomes]
rs9333016	0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1013048	chr1:47132831-47377364	Genic enhancers Enhancers Active TSS Flanking Active TSS Strong transcription Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
2	nsv534955	chr1:47132831-47377364	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs12758361	CYP4B1	cis	lung	GTEx

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
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