Variant report

Variant rs12777544
Chromosome Location chr10:5669810-5669811
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:5658000-5673600 Weak transcription Left Ventricle heart
2 chr10:5661600-5670000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr10:5661600-5670200 Weak transcription Right Atrium heart
4 chr10:5662200-5670600 Weak transcription Fetal Lung lung
5 chr10:5664000-5670200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr10:5665200-5670200 Weak transcription Esophagus oesophagus
7 chr10:5665200-5670200 Weak transcription Osteobl bone
8 chr10:5665200-5671800 Weak transcription Brain Inferior Temporal Lobe brain
9 chr10:5665200-5681800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr10:5665400-5670400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr10:5665400-5672600 Weak transcription Lung lung
12 chr10:5665400-5673800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr10:5665400-5680400 Weak transcription Brain Hippocampus Middle brain
14 chr10:5665400-5680600 Weak transcription Fetal Brain Female brain
15 chr10:5665600-5670200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr10:5665600-5670200 Weak transcription Colonic Mucosa Colon
17 chr10:5665600-5670200 Weak transcription Duodenum Mucosa Duodenum
18 chr10:5665600-5670400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr10:5665600-5670400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr10:5665600-5670400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr10:5665600-5670600 Weak transcription Primary T helper naive cells from peripheral blood blood
22 chr10:5665600-5670600 Weak transcription Primary T helper naive cells fromperipheralblood blood
23 chr10:5665600-5670600 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr10:5665600-5670600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr10:5665600-5670800 Weak transcription Primary B cells from peripheral blood blood
26 chr10:5665600-5670800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr10:5665600-5670800 Weak transcription Primary T killer memory cells from peripheral blood blood
28 chr10:5665600-5671000 Weak transcription Brain Substantia Nigra brain
29 chr10:5665600-5671000 Weak transcription A549 lung
30 chr10:5665600-5673400 Weak transcription HMEC breast
31 chr10:5665600-5680400 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr10:5665600-5680400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
33 chr10:5665600-5680400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
34 chr10:5665600-5681800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
35 chr10:5665600-5698600 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr10:5665800-5670200 Weak transcription Fetal Thymus thymus
37 chr10:5666800-5670400 Enhancers Fetal Muscle Leg muscle
38 chr10:5667000-5670400 Enhancers Fetal Muscle Trunk muscle
39 chr10:5667200-5674200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
40 chr10:5667800-5670200 Enhancers Ovary ovary
41 chr10:5668600-5670000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr10:5668600-5670400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr10:5668600-5670400 Enhancers Liver Liver
44 chr10:5668600-5670400 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr10:5668600-5670400 Weak transcription Psoas Muscle Psoas
46 chr10:5668600-5670400 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr10:5668600-5672000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
48 chr10:5668800-5670000 Weak transcription NHDF-Ad bronchial
49 chr10:5668800-5670200 Weak transcription Rectal Mucosa Donor 29 rectum
50 chr10:5668800-5670200 Weak transcription Rectal Mucosa Donor 31 rectum

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