The 2.0 version of rSNPBase

Variant report

Variant rs12777800
Chromosome Location chr10:1070361-1070362
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:1035000-1094000 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr10:1049400-1071200 Strong transcription A549 lung
3 chr10:1049600-1071600 Weak transcription Fetal Heart heart
4 chr10:1060000-1091600 Weak transcription Hela-S3 cervix
5 chr10:1063200-1092000 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr10:1063600-1088200 Weak transcription Fetal Brain Male brain
7 chr10:1064000-1083000 Weak transcription NHDF-Ad bronchial
8 chr10:1064000-1084400 Weak transcription Colonic Mucosa Colon
9 chr10:1064000-1088400 Weak transcription Rectal Smooth Muscle rectum
10 chr10:1064400-1082600 Weak transcription Primary neutrophils fromperipheralblood blood
11 chr10:1065200-1084800 Weak transcription Primary T helper naive cells fromperipheralblood blood
12 chr10:1065400-1082800 Weak transcription Primary hematopoietic stem cells blood
13 chr10:1065600-1083800 Weak transcription Fetal Lung lung
14 chr10:1065600-1086000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr10:1065600-1086200 Weak transcription Primary T killer naive cells fromperipheralblood blood
16 chr10:1065800-1082600 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr10:1065800-1086200 Weak transcription Colon Smooth Muscle Colon
18 chr10:1065800-1087800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
19 chr10:1066000-1080800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr10:1066000-1081000 Weak transcription iPS-20b Cell Line embryonic stem cell
21 chr10:1066000-1081200 Weak transcription iPS-18 Cell Line embryonic stem cell
22 chr10:1066000-1082000 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr10:1066000-1082400 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr10:1066000-1082600 Weak transcription Aorta Aorta
25 chr10:1066000-1083000 Weak transcription Primary T cells fromperipheralblood blood
26 chr10:1066000-1086000 Weak transcription HSMMtube muscle
27 chr10:1066200-1079600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr10:1066200-1082200 Weak transcription Duodenum Mucosa Duodenum
29 chr10:1066200-1082200 Weak transcription NH-A brain
30 chr10:1066200-1082400 Weak transcription Stomach Smooth Muscle stomach
31 chr10:1066200-1083200 Weak transcription Primary monocytes fromperipheralblood blood
32 chr10:1066200-1083400 Weak transcription Liver Liver
33 chr10:1066200-1085200 Weak transcription HUVEC blood vessel
34 chr10:1066200-1086000 Weak transcription H1 Cell Line embryonic stem cell
35 chr10:1066200-1086200 Weak transcription Fetal Kidney kidney
36 chr10:1066600-1081200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr10:1066600-1082400 Weak transcription Primary B cells from cord blood blood
38 chr10:1066600-1082800 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr10:1066600-1084000 Weak transcription Placenta Placenta
40 chr10:1066600-1088200 Weak transcription ES-I3 Cell Line embryonic stem cell
41 chr10:1066800-1073600 Weak transcription GM12878-XiMat blood
42 chr10:1066800-1079600 Weak transcription Ovary ovary
43 chr10:1066800-1079600 Weak transcription HMEC breast
44 chr10:1066800-1080400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr10:1066800-1081400 Weak transcription HUES64 Cell Line embryonic stem cell
46 chr10:1066800-1081600 Weak transcription Fetal Thymus thymus
47 chr10:1066800-1081800 Weak transcription Esophagus oesophagus
48 chr10:1066800-1082200 Weak transcription Primary T cells from cord blood blood
49 chr10:1066800-1082400 Weak transcription Fetal Adrenal Gland Adrenal Gland
50 chr10:1066800-1082400 Weak transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015