The 2.0 version of rSNPBase

Variant report

Variant rs34487581
Chromosome Location chr10:897201-897202
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:852200-956400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr10:870600-959400 Weak transcription Stomach Mucosa stomach
3 chr10:875400-903000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr10:883200-917200 Weak transcription Colonic Mucosa Colon
5 chr10:886400-902800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr10:886800-924400 Weak transcription Fetal Brain Male brain
7 chr10:890000-900000 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr10:890400-901800 Weak transcription Colon Smooth Muscle Colon
9 chr10:890400-902200 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr10:890400-902600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr10:890400-916000 Weak transcription Aorta Aorta
12 chr10:890600-897400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr10:890800-901200 Weak transcription Rectal Smooth Muscle rectum
14 chr10:891600-898800 Weak transcription HUES48 Cell Line embryonic stem cell
15 chr10:891600-901400 Weak transcription Placenta Amnion Placenta Amnion
16 chr10:891800-898000 Weak transcription Hela-S3 cervix
17 chr10:892200-901600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr10:892400-902400 Weak transcription Brain Hippocampus Middle brain
19 chr10:892600-903000 Weak transcription Brain Angular Gyrus brain
20 chr10:892600-909400 Weak transcription Small Intestine intestine
21 chr10:892800-909000 Weak transcription Brain Cingulate Gyrus brain
22 chr10:892800-909000 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr10:893000-899600 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr10:893000-900800 Strong transcription Fetal Lung lung
25 chr10:893000-902400 Weak transcription H9 Cell Line embryonic stem cell
26 chr10:893000-902400 Weak transcription Right Atrium heart
27 chr10:893000-902800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr10:893000-907600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
29 chr10:893000-909400 Weak transcription Primary T helper naive cells from peripheral blood blood
30 chr10:893200-898600 Weak transcription NH-A brain
31 chr10:893200-900800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
32 chr10:893200-902800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
33 chr10:893200-902800 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr10:893200-905400 Weak transcription Primary T killer memory cells from peripheral blood blood
35 chr10:893200-907000 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr10:893200-908200 Weak transcription Spleen Spleen
37 chr10:893400-897800 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr10:893400-897800 Weak transcription Esophagus oesophagus
39 chr10:893400-902400 Weak transcription Right Ventricle heart
40 chr10:893400-907800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
41 chr10:893600-897600 Weak transcription Placenta Placenta
42 chr10:894000-899600 Weak transcription Primary T cells fromperipheralblood blood
43 chr10:894000-912400 Weak transcription Psoas Muscle Psoas
44 chr10:894200-901600 Weak transcription Gastric stomach
45 chr10:894200-902800 Weak transcription NHLF lung
46 chr10:894400-906200 Weak transcription Ovary ovary
47 chr10:894600-902600 Strong transcription HSMM muscle
48 chr10:894800-897800 Weak transcription Pancreas Pancrea
49 chr10:895000-897400 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
50 chr10:895000-899200 Weak transcription Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015